RNA–Protein interactions for RNA: ENST00000449260.6

PMEL-201, Transcript of premelanosome protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PMEL, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-201ENST00000449260 ARFIP1P53367 373 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 RPS15AP62244 130 aaKnown RBP12.06□□□□□ -0.48
PMEL-201ENST00000449260 KCNC4Q03721 635 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 TGM3Q08188 693 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 GPR18Q14330 331 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 KIR2DS3Q14952 304 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 SMN1Q16637 294 aaKnown RBP12.06□□□□□ -0.48
PMEL-201ENST00000449260 ZNF542PQ5EBM4 170 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 ASPGQ86U10 573 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
PMEL-201ENST00000449260 FLVCR1-AS1Q8TAF5 88 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 PATE1Q8WXA2 126 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 PROX1Q92786 737 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 COG8Q96MW5 612 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 COL21A1Q96P44 957 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 PITX2Q99697 317 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 NIPSNAP1Q9BPW8 284 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 MAPKAP1Q9BPZ7 522 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 DCUN1D5Q9BTE7 237 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 GABARAPL3Q9BY60 117 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 KLHL25Q9H0H3 589 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 TCEAL2Q9H3H9 227 aaPredicted RBP12.06□□□□□ -0.48
PMEL-201ENST00000449260 SEMA3GQ9NS98 782 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 SCN3BQ9NY72 215 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 P2RX2Q9UBL9 471 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 ENTPD4Q9Y227 616 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
PMEL-201ENST00000449260 PFDN1O60925 122 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 CCNB2O95067 398 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 VIPP01282 170 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 POU2F1P14859 743 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 UGT2B7P16662 529 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 CSNK2A2P19784 350 aaPredicted RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 SNRPNP63162 240 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 RGS1Q08116 209 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 ILF3Q12906 894 aaKnown RBP eCLIP12.05□□□□□ -0.48
PMEL-201ENST00000449260 COL9A2Q14055 689 aaPredicted RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 SLC48A1Q6P1K1 146 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 OLIG3Q7RTU3 272 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 SUN3Q8TAQ9 357 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 PHF10Q8WUB8 498 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 HRASLS5Q96KN8 279 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 CNDP2Q96KP4 475 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 ZNF607Q96SK3 696 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 GPR174Q9BXC1 333 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 DGCR6LQ9BY27 220 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 ACTR10Q9NZ32 417 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 CES1P1Q9UKY3 287 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 POFUT2Q9Y2G5 429 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 MUC3AQ02505 3323 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 A0A0C4DFX4 3053 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 A0A0J9YVX5 310 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 E9PQ18 207 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 PRAMEF26H0Y7S4 382 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 TMX2-CTNND1H3BSU7 103 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 TPD52L2O43399 206 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 NOL3O60936 208 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 FAM20BO75063 409 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 IGHV4-34P06331 123 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 JUNDP17535 347 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 TSFMP43897 325 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 HMGA2P52926 109 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 LIM2P55344 173 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 TUBA3CQ13748 450 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 NPTX1Q15818 432 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 GTF2IRD2BQ6EKJ0 949 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 FIGLAQ6QHK4 219 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 TMEM107Q6UX40 140 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 ZNF605Q86T29 641 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 GTF2IRD2Q86UP8 949 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 SFTPA2Q8IWL1 248 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 SLC22A18ASQ8N1D0 253 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 VANGL1Q8TAA9 524 aaPredicted RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 GAL3ST3Q96A11 431 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 ALPK1Q96QP1 1244 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 DOK1Q99704 481 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 TREX2Q9BQ50 279 aaPredicted RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 CHRDQ9H2X0 955 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 ZNF556Q9HAH1 456 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 SEC14L3Q9UDX4 400 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 PAIP2BQ9ULR5 123 aaKnown RBP12.05□□□□□ -0.48
PMEL-201ENST00000449260 GON4LQ3T8J9 2241 aa12.05□□□□□ -0.48
PMEL-201ENST00000449260 KNL1Q8NG31 2342 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 OR2A25A4D2G3 310 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 FFAR1O14842 300 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 PCDHGA12O60330 932 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 CTSVO60911 334 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 INMTO95050 263 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 PCMT1P22061 227 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 CD6P30203 668 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 RABIFP47224 123 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 LIMS1P48059 325 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 KCNJ5P48544 419 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 KHKP50053 298 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 NUP107P57740 925 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 CXCR4P61073 352 aa12.04□□□□□ -0.48
PMEL-201ENST00000449260 LASP1Q14847 261 aaKnown RBP12.04□□□□□ -0.48
PMEL-201ENST00000449260 KIAA0895LQ68EN5 471 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms