RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 OPRM1P35372 400 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 PIK3CGP48736 1102 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 CAV1Q03135 178 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 SNTB1Q13884 538 aaKnown RBP12.2□□□□□ -0.46
HMGB3-204ENST00000448905 SLMAPQ14BN4 828 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 FBXL19-AS1Q494R0 122 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 ADGRD1Q6QNK2 874 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 CDC20BQ86Y33 519 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 PPM1NQ8N819 430 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 RHEBL1Q8TAI7 183 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
HMGB3-204ENST00000448905 SORBS1Q9BX66 1292 aaKnown RBP12.2□□□□□ -0.46
HMGB3-204ENST00000448905 DDX31Q9H8H2 851 aaKnown RBP12.2□□□□□ -0.46
HMGB3-204ENST00000448905 DMRT3Q9NQL9 472 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 AHSPQ9NZD4 102 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 CNOT11Q9UKZ1 510 aaKnown RBP12.2□□□□□ -0.46
HMGB3-204ENST00000448905 ZFHX3Q15911 3703 aa12.2□□□□□ -0.46
HMGB3-204ENST00000448905 A0A087X1B8 175 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 A0A1W2PR48 441 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 LRRC3CA6NJW4 275 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 GLOD5A6NK44 160 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 H0YIV9 168 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 UBXN8O00124 270 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 FOXE1O00358 373 aaPredicted RBP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 UGDHO60701 494 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 GUCY1B2O75343 617 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 GOSR1O95249 250 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 HPNP05981 417 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 NR2F6P10588 404 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 GFAPP14136 432 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 CTSSP25774 331 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 RPS13P62277 151 aaKnown RBP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 KEAP1Q14145 624 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 RCAN2Q14206 197 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 EBPQ15125 230 aaKnown RBP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 RPS6KA2Q15349 733 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 ACSF3Q4G176 576 aaPredicted RBP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 NSUN5P2Q63ZY6 315 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 VASNQ6EMK4 673 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 METTL2BQ6P1Q9 378 aaKnown RBP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 KLC3Q6P597 504 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 TNIP2Q8NFZ5 429 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 OR4K14Q8NGD5 310 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 UBTD2Q8WUN7 234 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 ATP6V1E2Q96A05 226 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 RILPQ96NA2 401 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 GNRHR2Q96P88 292 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 ATOH8Q96SQ7 321 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 ANGPTL4Q9BY76 406 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 EPB41L4BQ9H329 900 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 LIME1Q9H400 295 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 IPPKQ9H8X2 491 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 CALHM2Q9HA72 323 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 PROK2Q9HC23 129 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 CAMK2AQ9UQM7 478 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 PLEKHA6Q9Y2H5 1048 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 UTP11Q9Y3A2 253 aaKnown RBP12.19□□□□□ -0.46
HMGB3-204ENST00000448905 ASB4Q9Y574 426 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 HCFC1P51610 2035 aa12.19□□□□□ -0.46
HMGB3-204ENST00000448905 CD8B2A6NJW9 211 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 RAF1P04049 648 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 NAGAP17050 411 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 STX2P32856 288 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 ARL1P40616 181 aaPredicted RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 CDK9P50750 372 aaKnown RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 HNRNPH2P55795 449 aaKnown RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 EEF1A1P68104 462 aaKnown RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 CRYZQ08257 329 aaKnown RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 NAB1Q13506 487 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 ACAP2Q15057 778 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 PFKFB4Q16877 469 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 KBTBD12Q3ZCT8 623 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 EEF1A1P5Q5VTE0 462 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 OR52E8Q6IFG1 317 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 MRM1Q6IN84 353 aaKnown RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 SCIMPQ6UWF3 145 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 SEM1Q6ZVN7 128 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 PAGE2Q7Z2X7 111 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 NUDT13Q86X67 352 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 GALNT12Q8IXK2 581 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 OR7G1Q8NGA0 311 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 SPPL2AQ8TCT8 520 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 DOK4Q8TEW6 326 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 ABTB1Q969K4 478 aaPredicted RBP12.18□□□□□ -0.46
HMGB3-204ENST00000448905 NXNL1Q96CM4 212 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 DTNBP1Q96EV8 351 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 TRIB1Q96RU8 372 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 SERPINI1Q99574 410 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 YIPF4Q9BSR8 244 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 PRDM14Q9GZV8 571 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 OR10A5Q9H207 317 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 DPH5Q9H2P9 285 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 CXorf21Q9HAI6 301 aa12.18□□□□□ -0.46
HMGB3-204ENST00000448905 PSME2Q9UL46 239 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms