RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 LOC100130705A0A1B0GUX0 176 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 TMEM247A6NEH6 219 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 TRIM64CA6NLI5 447 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 LMO7DNF2Z398 122 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 GALR3O60755 368 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 JRKO75564 520 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 DNAJB5O75953 348 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 ITGAMP11215 1152 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 TLX1P31314 330 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 NR1H2P55055 460 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 TUBA4AP68366 448 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 DMWDQ09019 674 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 PUM1Q14671 1186 aaKnown RBP eCLIP16.66■□□□□ 0.262e-15■□□□□ 10.7
LMNA-208ENST00000448611 LTB4RQ15722 352 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 THAP5Q7Z6K1 395 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 SAMD14Q8IZD0 417 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 C8orf59Q8N0T1 100 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 ARHGEF39Q8N4T4 335 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 OR4K14Q8NGD5 310 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 OR4C15Q8NGM1 316 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 CCDC3Q9BQI4 270 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 YTHDF1Q9BYJ9 559 aaKnown RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 IL21RQ9HBE5 538 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 STARD5Q9NSY2 213 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 ENPP4Q9Y6X5 453 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 SLC9B1P1A6NJY1 282 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 TNFRSF11BO00300 401 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 PROS1P07225 676 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 FESP07332 822 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 CTSBP07858 339 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 YAP1P46937 504 aaKnown RBP16.65■□□□□ 0.26
LMNA-208ENST00000448611 ANXA11P50995 505 aaKnown RBP16.65■□□□□ 0.26
LMNA-208ENST00000448611 XKP51811 444 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 CDH15P55291 814 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 KCNC4Q03721 635 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 FUT5Q11128 374 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 COL9A2Q14055 689 aaPredicted RBP16.65■□□□□ 0.26
LMNA-208ENST00000448611 DEFB133Q30KQ1 61 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 DEFB110Q30KQ9 67 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 NADK2Q4G0N4 442 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 OGFOD3Q6PK18 319 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 USP53Q70EK8 1073 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 GALNT5Q7Z7M9 940 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 ZNF605Q86T29 641 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 SHISA5Q8N114 240 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 SDR16C5Q8N3Y7 309 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 NUP43Q8NFH3 380 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 GIMAP5Q96F15 307 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 OTUB1Q96FW1 271 aaPredicted RBP16.65■□□□□ 0.26
LMNA-208ENST00000448611 C16orf58Q96GQ5 468 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 ZNF607Q96SK3 696 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 SLC38A3Q99624 504 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 YIPF4Q9BSR8 244 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 ANKRA2Q9H9E1 313 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 C3orf14Q9HBI5 128 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 BCL2L10Q9HD36 194 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 EXD2Q9NVH0 621 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 NAALAD2Q9Y3Q0 740 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 PCDHGA8Q9Y5G5 932 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 GPC6Q9Y625 555 aaPredicted RBP16.65■□□□□ 0.26
LMNA-208ENST00000448611 BDP1A6H8Y1 2624 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 EML5Q05BV3 1969 aa16.65■□□□□ 0.26
LMNA-208ENST00000448611 SMIM31A0A1B0GVY4 71 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 J3KTA2 159 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 CYR61O00622 381 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 NR2F1P10589 423 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 MAN2A2P49641 1150 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 LGI4Q8N135 537 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 OR5T3Q8NGG3 340 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 KAT2AQ92830 837 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 PIP5K1AQ99755 562 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 DUSP15Q9H1R2 295 aaPredicted RBP16.64■□□□□ 0.26
LMNA-208ENST00000448611 UCKL1Q9NWZ5 548 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 TUBA8Q9NY65 449 aaPredicted RBP16.64■□□□□ 0.26
LMNA-208ENST00000448611 NTMQ9P121 344 aa16.64■□□□□ 0.26
LMNA-208ENST00000448611 ABCA7Q8IZY2 2146 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 CEP192Q8TEP8 1941 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 SDC3O75056 442 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 IFNW1P05000 195 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 ELK4P28324 431 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 PPP2R1BP30154 601 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 KCNJ5P48544 419 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 SPIBQ01892 262 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 IL18R1Q13478 541 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 ZNF691Q5VV52 312 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 MCATQ8IVS2 390 aaKnown RBP16.64■□□□□ 0.25
LMNA-208ENST00000448611 OR4N5Q8IXE1 308 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 CA13Q8N1Q1 262 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 DNAJC22Q8N4W6 341 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 ATG16L2Q8NAA4 619 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 OR7G2Q8NG99 324 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 COL21A1Q96P44 957 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 MAP3K3Q99759 626 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 NDUFA13Q9P0J0 144 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 KCNE3Q9Y6H6 103 aa16.64■□□□□ 0.25
LMNA-208ENST00000448611 A0A087WXM4 84 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms