RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TRIM46Q7Z4K8 759 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 DOLPP1Q86YN1 238 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 ARMC10Q8N2F6 343 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 TTLQ8NG68 377 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 UTP15Q8TED0 518 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 FAR2Q96K12 515 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 OR52B2Q96RD2 323 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 SPOCK3Q9BQ16 436 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 RBCK1Q9BYM8 510 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 DEFB126Q9BYW3 111 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 TRIM8Q9BZR9 551 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 TSPAN10Q9H1Z9 355 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 PRDM9Q9NQV7 894 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 SAGE2PA6NJ88 616 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SLC28A1O00337 649 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 PLPP1O14494 284 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SHOX2O60902 331 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 PEX11AO75192 247 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 EEDO75530 441 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 GBAP04062 536 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ALOX15P16050 662 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF24P17028 368 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 TPP2P29144 1249 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 EPHA3P29320 983 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SERPINB1P30740 379 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 IDH3AP50213 366 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ST13P50502 369 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 HK2P52789 917 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 OLR1P78380 273 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 TBL3Q12788 808 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ADPRMQ3LIE5 342 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 GALNTL6Q49A17 601 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 DEPDC1Q5TB30 811 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF468Q5VIY5 522 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF793Q6ZN11 406 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF295-AS1Q8N0V1 137 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 KIF2BQ8N4N8 673 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 C1orf52Q8N6N3 182 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 TUBGCP3Q96CW5 907 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 SERPINI1Q99574 410 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 EBPLQ9BY08 206 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF717Q9BY31 904 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 REXO4Q9GZR2 422 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 AKTIPQ9H8T0 292 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 BRF2Q9HAW0 419 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 ADGRE2Q9UHX3 823 aa12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 KLF13Q9Y2Y9 288 aaPredicted RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 INTS1Q8N201 2190 aaKnown RBP12.79□□□□□ -0.36
PDLIM2-213ENST00000448520 PDZD2O15018 2839 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 A0A0G2JND7 137 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 TCRBV16S1A1N1A0A5B0 115 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 SERTM1A2A2V5 107 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 LSM1O15116 133 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 RGS14O43566 566 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 HSD3B1P14060 373 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 PTX3P26022 381 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 HSD3B2P26439 372 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 CERS1P27544 350 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 GSTM2P28161 218 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 BSGP35613 385 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 CLCN2P51788 898 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 RAP1GDS1P52306 607 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 RAE1P78406 368 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 BTN3A2P78410 334 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 BTG2P78543 158 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 AP5B1Q2VPB7 878 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 ABHD17CQ6PCB6 329 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 EPGNQ6UW88 154 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 RNF165Q6ZSG1 346 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 NFAM1Q8NET5 270 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 OR2L5Q8NG80 312 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 GAL3ST3Q96A11 431 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 MARK4Q96L34 752 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 QRFPRQ96P65 431 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 C1orf50Q9BV19 199 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 TMEM120AQ9BXJ8 343 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 LRTM1Q9HBL6 345 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 PRDM7Q9NQW5 492 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 COQ3Q9NZJ6 369 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 VPS29Q9UBQ0 182 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 VTI1BQ9UEU0 232 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 MMACHCQ9Y4U1 282 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 POLR3HQ9Y535 204 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 C2CD3Q4AC94 2353 aa12.78□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.36
PDLIM2-213ENST00000448520 OTOGQ6ZRI0 2925 aa12.77□□□□□ -0.36
PDLIM2-213ENST00000448520 IGKV3D-11A0A0A0MRZ8 115 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 SYNDIG1LA6NDD5 238 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 TRPC5OSA6NMA1 111 aa12.77□□□□□ -0.37
PDLIM2-213ENST00000448520 SLCO1B7G3V0H7 640 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms