RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 TNFRSF21O75509 655 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 ZNF28P17035 718 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 NT5EP21589 574 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 FBLP22087 321 aaKnown RBP23.32■■□□□ 1.32
RFFL-206ENST00000447669 LCN8Q6JVE9 175 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 RHBDD2Q6NTF9 364 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 NIPAL1Q6NVV3 410 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 NCLNQ969V3 563 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 MVB12AQ96EY5 273 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 RSRC1Q96IZ7 334 aaKnown RBP23.32■■□□□ 1.32
RFFL-206ENST00000447669 GMEB1Q9Y692 573 aa23.32■■□□□ 1.32
RFFL-206ENST00000447669 H3BNX3 289 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 KRT75O95678 551 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 PPIBP23284 216 aaKnown RBP23.31■■□□□ 1.32
RFFL-206ENST00000447669 AQP1P29972 269 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 LASP1Q14847 261 aaKnown RBP23.31■■□□□ 1.32
RFFL-206ENST00000447669 CPZQ66K79 652 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 LCN10Q6JVE6 187 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 DHRS13Q6UX07 377 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 CEACAM20Q6UY09 585 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 SLCO4A1Q96BD0 722 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 ALOXE3Q9BYJ1 711 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 RNPEPL1Q9HAU8 725 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 SEMA3GQ9NS98 782 aa23.31■■□□□ 1.32
RFFL-206ENST00000447669 FAF1Q9UNN5 650 aaPredicted RBP23.31■■□□□ 1.32
RFFL-206ENST00000447669 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.3■■□□□ 1.32
RFFL-206ENST00000447669 CTNSO60931 367 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 RFPL3O75679 317 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 HMGN2P05204 90 aaKnown RBP23.3■■□□□ 1.32
RFFL-206ENST00000447669 SESN3P58005 492 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 STX4Q12846 297 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 TRA2AQ13595 282 aaKnown RBP eCLIP23.3■■□□□ 1.32
RFFL-206ENST00000447669 DSG2Q14126 1118 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 VMACQ2NL98 169 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 MINDY4Q4G0A6 757 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 COX15Q7KZN9 410 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 ZNF595Q8IYB9 648 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 FAM86B1Q8N7N1 296 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 NUP43Q8NFH3 380 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 CANT1Q8WVQ1 401 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 KNTC1P50748 2209 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 TCRBV5S2A0A599 114 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 TCRBV3S1A0A5B6 114 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 HRKO00198 91 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 POLR1CO15160 346 aaPredicted RBP23.3■■□□□ 1.32
RFFL-206ENST00000447669 LRP3O75074 770 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 BMP10O95393 424 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 BAG2O95816 211 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 ZNF628Q5EBL2 1059 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 OLIG3Q7RTU3 272 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 SLC44A2Q8IWA5 706 aaPredicted RBP23.3■■□□□ 1.32
RFFL-206ENST00000447669 AMER2Q8N7J2 671 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 DEFB124Q8NES8 71 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 JADE3Q92613 823 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 DCLRE1BQ9H816 532 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 PRDM9Q9NQV7 894 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 MAGEL2Q9UJ55 1249 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 CDC14AQ9UNH5 594 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 CORO2BQ9UQ03 480 aa23.3■■□□□ 1.32
RFFL-206ENST00000447669 MRPS33Q9Y291 106 aaKnown RBP23.3■■□□□ 1.32
RFFL-206ENST00000447669 CREG1O75629 220 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 STAMBPO95630 424 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 ATP1B1P05026 303 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 RHDQ02161 417 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 EXOSC7Q15024 291 aaKnown RBP23.29■■□□□ 1.32
RFFL-206ENST00000447669 TRIP6Q15654 476 aaKnown RBP23.29■■□□□ 1.32
RFFL-206ENST00000447669 PRICKLE4Q2TBC4 344 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 ZC3H7AQ8IWR0 971 aaKnown RBP23.29■■□□□ 1.32
RFFL-206ENST00000447669 TSLPQ969D9 159 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 SLC35G5Q96KT7 338 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 NSMCE2Q96MF7 247 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 PTCHD1Q96NR3 888 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 CDC6Q99741 560 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 OR51I1Q9H343 314 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 SRPK3Q9UPE1 567 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 AP3M1Q9Y2T2 418 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 KCNE3Q9Y6H6 103 aa23.29■■□□□ 1.32
RFFL-206ENST00000447669 CLDN4O14493 209 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 EMC8O43402 210 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 OR10H2O60403 315 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 C8BP07358 591 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 OR12D1P0DN82 309 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 ETV5P41161 510 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 PRIM2P49643 509 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 MGAT2Q10469 447 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 PIP4P1Q86T03 277 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 PROSER1Q86XN7 944 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 NFKBIDQ8NI38 313 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 FAM162AQ96A26 154 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 DDX18Q9NVP1 670 aaKnown RBP23.28■■□□□ 1.32
RFFL-206ENST00000447669 MAT2BQ9NZL9 334 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 AURKCQ9UQB9 309 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 TEX51A0A1B0GUA7 166 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 HMGN4O00479 90 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 FGF5P12034 268 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 MATN1P21941 496 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 VAC14Q08AM6 782 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 GCNT6Q5T4J0 391 aa23.28■■□□□ 1.32
RFFL-206ENST00000447669 SLCO6A1Q86UG4 719 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms