RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LPLP06858 475 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 IL2P60568 153 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 LRRC32Q14392 662 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 DUOXA1Q1HG43 343 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 KANSL1Q7Z3B3 1105 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 PIH1D2Q8WWB5 315 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 CHFRQ96EP1 664 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 FCRL1Q96LA6 429 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 CXorf58Q96LI9 332 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 SLC38A3Q99624 504 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 ZNF251Q9BRH9 671 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 TMPRSS13Q9BYE2 586 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 HS3ST4Q9Y661 456 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 TRDV1A0A1B0GX56 115 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 A0A1W2PQ45 241 aaPredicted RBP18.23■□□□□ 0.51
HMGA1-205ENST00000447654 A0A1W2PQY0 241 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 TMEM82A0PJX8 343 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 SLC28A2O43868 658 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 TCRBP04435 133 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 CCR1P32246 355 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 CSKP41240 450 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 CDKN2CP42773 168 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 RENBPP51606 427 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 HMGA2P52926 109 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 SLC14A1Q13336 389 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 USP30Q70CQ3 517 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 OR2T35Q8NGX2 323 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 HBEGFQ99075 208 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 GPR21Q99679 349 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 C7orf50Q9BRJ6 194 aaKnown RBP18.23■□□□□ 0.51
HMGA1-205ENST00000447654 IER2Q9BTL4 223 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 MALT1Q9UDY8 824 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 CORO2BQ9UQ03 480 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 SF3B6Q9Y3B4 125 aaKnown RBP18.23■□□□□ 0.51
HMGA1-205ENST00000447654 SNX11Q9Y5W9 270 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 G3V3Q6 166 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 TBX18O95935 607 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 EOMESO95936 686 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 ACPPP15309 386 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 ENGP17813 658 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 AHCYP23526 432 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 GABRA5P31644 462 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 CNR2P34972 360 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 MICBQ29980 383 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 SIRPB2Q5JXA9 342 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 NLRC3Q7RTR2 1065 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 TSEN54Q7Z6J9 526 aaKnown RBP18.23■□□□□ 0.51
HMGA1-205ENST00000447654 ZER1Q7Z7L7 766 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 TADA1Q96BN2 335 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 THAP7Q9BT49 309 aaPredicted RBP18.23■□□□□ 0.51
HMGA1-205ENST00000447654 SPATA5L1Q9BVQ7 753 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 TRPS1Q9UHF7 1281 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 FAM50BQ9Y247 325 aa18.23■□□□□ 0.51
HMGA1-205ENST00000447654 ANKDD1BA6NHY2 528 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 CCL22O00626 93 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 CASKO14936 926 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 SMAD6O43541 496 aaKnown RBP18.22■□□□□ 0.51
HMGA1-205ENST00000447654 ULK1O75385 1050 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 SELENOWP63302 87 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 MTAPQ13126 283 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 OCLNQ16625 522 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 TCTN1Q2MV58 587 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 HFEQ30201 348 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 Q3ZCU0 254 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 SEZ6L2Q6UXD5 910 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 TMIEQ8NEW7 156 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 OR52N1Q8NH53 320 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 MOSPD2Q8NHP6 518 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 SETD7Q8WTS6 366 aaKnown RBP18.22■□□□□ 0.51
HMGA1-205ENST00000447654 ESAMQ96AP7 390 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 GPR62Q9BZJ7 368 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 IPPKQ9H8X2 491 aa18.22■□□□□ 0.51
HMGA1-205ENST00000447654 DSPPQ9NZW4 1301 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 TLR4O00206 839 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 EPOP01588 193 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 APOC3P02656 99 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 TYRP14679 529 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 PPIBP23284 216 aaKnown RBP18.21■□□□□ 0.51
HMGA1-205ENST00000447654 PBX3P40426 434 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 VSX2P58304 361 aaPredicted RBP18.21■□□□□ 0.51
HMGA1-205ENST00000447654 TSPAN5P62079 268 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 SPIBQ01892 262 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 GSG1Q2KHT4 349 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 EXOC3L2Q2M3D2 409 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 ATRAIDQ6UW56 229 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 RSPO2Q6UXX9 243 aaPredicted RBP18.21■□□□□ 0.51
HMGA1-205ENST00000447654 PRICKLE2Q7Z3G6 844 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 PDZD9Q8IXQ8 264 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 CMIPQ8IY22 773 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 USP7Q93009 1102 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 YIPF4Q9BSR8 244 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 NKX6-2Q9C056 277 aaPredicted RBP18.21■□□□□ 0.51
HMGA1-205ENST00000447654 DNMT3AQ9Y6K1 912 aaPredicted RBP18.21■□□□□ 0.51
HMGA1-205ENST00000447654 ALPK3Q96L96 1907 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 TRAV6A0A075B6T7 132 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 M0R129 80 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 NBNO60934 754 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 CBX7O95931 251 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 HRGP04196 525 aa18.21■□□□□ 0.51
HMGA1-205ENST00000447654 S100A8P05109 93 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms