RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 POLR1CO15160 346 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 PQBP1O60828 265 aaKnown RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 LAG3P18627 525 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 BSGP35613 385 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 MLLT3P42568 568 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 GIPRP48546 466 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 GAS1P54826 345 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 WNT4P56705 351 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 CDK5Q00535 292 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 GPAT3Q53EU6 434 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 ATAT1Q5SQI0 421 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 PDZK1Q5T2W1 519 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 C22orf42Q6IC83 251 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 PODNL1Q6PEZ8 512 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 VASH1Q7L8A9 365 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 LAPTM4BQ86VI4 370 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 IQCF1Q8N6M8 205 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 VN1R2Q8NFZ6 395 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 TREX2Q9BQ50 279 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-204ENST00000447182 OR2AG1Q9H205 316 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 SLA2Q9H6Q3 261 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 SAGE1Q9NXZ1 904 aa18.07■□□□□ 0.48
SDCBP-204ENST00000447182 TMEM129A0AVI4 362 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 MMP11P24347 488 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 TPBGQ13641 420 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 UTS2BQ765I0 119 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 TRMT11Q7Z4G4 463 aaKnown RBP18.06■□□□□ 0.48
SDCBP-204ENST00000447182 NOXA1Q86UR1 476 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 TBC1D19Q8N5T2 526 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 SORCS1Q8WY21 1168 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 AP3S1Q92572 193 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 LRR1Q96L50 414 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 TMEM246Q9BRR3 403 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 ABCG4Q9H172 646 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 FGF20Q9NP95 211 aaPredicted RBP18.06■□□□□ 0.48
SDCBP-204ENST00000447182 TMEM98Q9Y2Y6 226 aa18.06■□□□□ 0.48
SDCBP-204ENST00000447182 SF3B6Q9Y3B4 125 aaKnown RBP18.06■□□□□ 0.48
SDCBP-204ENST00000447182 IRGMA1A4Y4 181 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 CARNS1A5YM72 827 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 TMCC2O75069 709 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 YES1P07947 543 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 CLEC2LP0C7M8 214 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 MYL9P24844 172 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 PIN1Q13526 163 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 GINS1Q14691 196 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 DUSP6Q16828 381 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 POM121L1PQ3SYA9 428 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 SPDYE7PQ495Y7 208 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF628Q5EBL2 1059 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 PARS2Q7L3T8 475 aaKnown RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 NANOGNBQ7Z5D8 188 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ZER1Q7Z7L7 766 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ZBED6CLQ96FA7 236 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF514Q96K75 400 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 FRMD6Q96NE9 622 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 MS4A8Q9BY19 250 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ZDHHC5Q9C0B5 715 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 SERHL2Q9H4I8 314 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 MTG2Q9H4K7 406 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 RNF121Q9H920 327 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 RMI1Q9H9A7 625 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ITM2BQ9Y287 266 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 SPIN1Q9Y657 262 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 LINC00854A0A1B0GVQ3 168 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 SH3BP5O60239 455 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 GUCY1B2O75343 617 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 C8AP07357 584 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 TSPAN19P0C672 248 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 NR2F6P10588 404 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 MYL12AP19105 171 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 SDC2P34741 201 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 CCR2P41597 374 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 RACK1P63244 317 aaKnown RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 RAB40BQ12829 278 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 HSPB3Q12988 150 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 CLPPQ16740 277 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ENTPD8Q5MY95 495 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 PPP2R2DQ66LE6 453 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ACSM5Q6NUN0 579 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 C1orf94Q6P1W5 598 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF547Q8IVP9 402 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 OR4K5Q8NGD3 323 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 TTYH2Q9BSA4 534 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 KATNB1Q9BVA0 655 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 ACSS1Q9NUB1 689 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 PAQR5Q9NXK6 330 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-204ENST00000447182 TBC1D14Q9P2M4 693 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 P2RX2Q9UBL9 471 aa18.05■□□□□ 0.48
SDCBP-204ENST00000447182 PRAMEF27A3QJZ7 478 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 SLC28A2O43868 658 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 ACP2P11117 423 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 HLA-DMAP28067 261 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 CCT3P49368 545 aaKnown RBP18.04■□□□□ 0.48
SDCBP-204ENST00000447182 VASPP50552 380 aaPredicted RBP18.04■□□□□ 0.48
SDCBP-204ENST00000447182 MLC1Q15049 377 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 LILRA6Q6PI73 481 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 ZNF730Q6ZMV8 503 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 QSOX2Q6ZRP7 698 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 CD99L2Q8TCZ2 262 aa18.04■□□□□ 0.48
SDCBP-204ENST00000447182 TMEM203Q969S6 136 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms