RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 CCDC151A5D8V7 595 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 ESPNB1AK53 854 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 CCL21O00585 134 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 TFECO14948 347 aaPredicted RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 PCDH7O60245 1069 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 SPAG7O75391 227 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 IL3P08700 152 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 CCL3P10147 92 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 S1PR1P21453 382 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 CNR1P21554 472 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 CA7P43166 264 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 NR0B1P51843 470 aaKnown RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 TRA2BP62995 288 aaKnown RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 FUT7Q11130 342 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 PCLAFQ15004 111 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 EBPQ15125 230 aaKnown RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 ZNF791Q3KP31 576 aaPredicted RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 SPDYAQ5MJ70 313 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 LIPMQ5VYY2 423 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 FAM111BQ6SJ93 734 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 LYPD8Q6UX82 237 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 SPPL2CQ8IUH8 684 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 SRRM1Q8IYB3 904 aaKnown RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 GHDCQ8N2G8 530 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 RIBC1Q8N443 379 aaPredicted RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 BANPQ8N9N5 519 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 OR2M7Q8NG81 312 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 OR52N2Q8NGI0 321 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 SLC22A8Q8TCC7 542 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 CAVIN3Q969G5 261 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 KLHL29Q96CT2 875 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 APOPT1Q96IL0 206 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 MAGED4Q96JG8 741 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 FAIM2Q9BWQ8 316 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 GATA5Q9BWX5 397 aaPredicted RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 EBPLQ9BY08 206 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 ROPN1BQ9BZX4 212 aaPredicted RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 BRINP2Q9C0B6 783 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 OR10A5Q9H207 317 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 ROPN1Q9HAT0 212 aaPredicted RBP13.63□□□□□ -0.23
USE1-202ENST00000445667 LGALS13Q9UHV8 139 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 TINAGQ9UJW2 476 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 PSME2Q9UL46 239 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 DLGAP4Q9Y2H0 992 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 ZNF835Q9Y2P0 537 aa13.63□□□□□ -0.23
USE1-202ENST00000445667 USP9YO00507 2555 aaPredicted RBP13.62□□□□□ -0.23
USE1-202ENST00000445667 C2orf92A0A1B0GVN3 265 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 SERTM1A2A2V5 107 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 GOLGA6L10A6NI86 522 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 OR6C76A6NM76 312 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 CDC40O60508 579 aaKnown RBP eCLIP13.62□□□□□ -0.23
USE1-202ENST00000445667 CRCPO75575 148 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 PDE9AO76083 593 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 P04436 131 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 CSNK2A2P19784 350 aaPredicted RBP13.62□□□□□ -0.23
USE1-202ENST00000445667 PIGAP37287 484 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 DNASE1L1P49184 302 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 NAA20P61599 178 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 PLGLB1Q02325 96 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 MGAT2Q10469 447 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.62□□□□□ -0.23
USE1-202ENST00000445667 SPIN4Q56A73 249 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 C6orf163Q5TEZ5 329 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 CLEC6AQ6EIG7 209 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 TMEM64Q6YI46 380 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 FAM47EQ6ZV65 393 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 MAMDC2Q7Z304 686 aaPredicted RBP13.62□□□□□ -0.23
USE1-202ENST00000445667 SLC15A4Q8N697 577 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 ZNF615Q8N8J6 731 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 GOLM1Q8NBJ4 401 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 SIMC1Q8NDZ2 872 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 ADCY4Q8NFM4 1077 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 C16orf78Q8WTQ4 265 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 CNRIP1Q96F85 164 aaPredicted RBP13.62□□□□□ -0.23
USE1-202ENST00000445667 SGCZQ96LD1 299 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 FAM111AQ96PZ2 611 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 IQCGQ9H095 443 aaKnown RBP13.62□□□□□ -0.23
USE1-202ENST00000445667 DEFB127Q9H1M4 99 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 SACM1LQ9NTJ5 587 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 SLC17A7Q9P2U7 560 aa13.62□□□□□ -0.23
USE1-202ENST00000445667 CROCCQ5TZA2 2017 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 A0A1B0GTH9 108 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 FAM166BA8MTA8 275 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 TRIM13O60858 407 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 ANXA4P09525 319 aaPredicted RBP13.61□□□□□ -0.23
USE1-202ENST00000445667 CREB1P16220 341 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 ABOP16442 354 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 ALDH3A1P30838 453 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 TIA1P31483 386 aaKnown RBP eCLIP13.61□□□□□ -0.23
USE1-202ENST00000445667 SOX18P35713 384 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 CASP6P55212 293 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 PPIAP62937 165 aaKnown RBP13.61□□□□□ -0.23
USE1-202ENST00000445667 MAP4K2Q12851 820 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 EXOSC7Q15024 291 aaKnown RBP13.61□□□□□ -0.23
USE1-202ENST00000445667 LTB4RQ15722 352 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 IMPG1Q17R60 797 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 PRICKLE4Q2TBC4 344 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 CMPK2Q5EBM0 449 aa13.61□□□□□ -0.23
USE1-202ENST00000445667 HLA-DQA1Q5Y7H0 255 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms