RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM203Q969S6 136 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 EID2BQ96D98 161 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 TSSK6Q9BXA6 273 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ZFYVE1Q9HBF4 777 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 EVA1BQ9NVM1 165 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 PTTG3PQ9NZH4 202 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 COQ3Q9NZJ6 369 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CRLS1Q9UJA2 301 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 MGAT4AQ9UM21 535 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ENPP4Q9Y6X5 453 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CIB4A0PJX0 185 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 SCAMP2O15127 329 aaKnown RBP11.3□□□□□ -0.6
LTBR-203ENST00000441074 CHP2O43745 196 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 TRBC1P01850 177 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ADH1AP07327 375 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 OSMP13725 252 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 HLA-FP30511 346 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 RPIAP49247 311 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 INPP1P49441 399 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 RBBP4Q09028 425 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 RIPPLY1Q0D2K3 151 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ILKQ13418 452 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 GAB1Q13480 694 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CDH18Q13634 790 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CLLU1Q5K131 121 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CPTPQ5TA50 214 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 C12orf73Q69YU5 71 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 GPR139Q6DWJ6 353 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 BRAT1Q6PJG6 821 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 TMEM107Q6UX40 140 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 FAM92BQ6ZTR7 304 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 TRILQ7L0X0 811 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
LTBR-203ENST00000441074 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 APCDD1Q8J025 514 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 LRRC17Q8N6Y2 441 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 OR52P1PQ8NH57 321 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ING5Q8WYH8 240 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 TOE1Q96GM8 510 aaKnown RBP11.3□□□□□ -0.6
LTBR-203ENST00000441074 SLC6A18Q96N87 628 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 SORCS2Q96PQ0 1159 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 EMC7Q9NPA0 242 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ARL15Q9NXU5 204 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 RWDD3Q9Y3V2 267 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 TRIOO75962 3097 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 PLXNA4Q9HCM2 1894 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 HPGDSO60760 199 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ADAP00813 363 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 RHCEP18577 417 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 GKP32189 559 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 CRATP43155 626 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 MAPK8P45983 427 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 PTPN5P54829 565 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ZNF33BQ06732 778 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 SCARB2Q14108 478 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 IL18Q14116 193 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 FCN2Q15485 313 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 OCLNQ16625 522 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 FLYWCH1Q4VC44 716 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 KLHL12Q53G59 568 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 PRSS42Q7Z5A4 293 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 C12orf76Q8N812 135 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 MED28Q9H204 178 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ZFP64Q9NPA5 681 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.29□□□□□ -0.6
LTBR-203ENST00000441074 ZNF224Q9NZL3 707 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 TNFRSF10DQ9UBN6 386 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 REV1Q9UBZ9 1251 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ZNF282Q9UDV7 671 aaPredicted RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 MALT1Q9UDY8 824 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 HCN2Q9UL51 889 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 DIMT1Q9UNQ2 313 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 RUVBL1Q9Y265 456 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 ASB4Q9Y574 426 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 GLYATL1P3A0A0U1RQE8 302 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 A0A1W2PPC1 479 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 GABRR3A8MPY1 467 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ISM1B1AKI9 464 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 IFNA7P01567 189 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 IFNA14P01570 189 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ALPIP09923 528 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 ETFAP13804 333 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 SPAM1P38567 509 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 GSTM5P46439 218 aa11.29□□□□□ -0.6
LTBR-203ENST00000441074 AGFG1P52594 562 aaKnown RBP11.29□□□□□ -0.6
LTBR-203ENST00000441074 MVDP53602 400 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms