RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ABHD12BQ7Z5M8 362 aaPredicted RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 CARM1Q86X55 608 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 MUCL1Q96DR8 90 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SRA1Q9HD15 236 aaKnown RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 LTB4R2Q9NPC1 389 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SACM1LQ9NTJ5 587 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SLC22A2O15244 555 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 FESP07332 822 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 BMP1P13497 986 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 FDXRP22570 491 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SLC5A2P31639 672 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 PGGT1BP53609 377 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 RAB2AP61019 212 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 MAT1AQ00266 395 aaKnown RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 ZP2Q05996 745 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 C6orf15Q6UXA7 325 aaPredicted RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SYNPOQ8N3V7 929 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SLCO2A1Q92959 643 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 CCDC74AQ96AQ1 378 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 HAVCR1Q96D42 359 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 INSM2Q96T92 566 aaPredicted RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 DIABLOQ9NR28 239 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 AGPAT4Q9NRZ5 378 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 ARGFXA6NJG6 315 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SOBPA7XYQ1 873 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 PPM1BO75688 479 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 ECHS1P30084 290 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 CSNK1DP48730 415 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 TSC22D1Q15714 1073 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 ESX1Q8N693 406 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 RCBTB1Q8NDN9 531 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 OR9I1Q8NGQ6 314 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 OR9A4Q8NGU2 314 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 C16orf78Q8WTQ4 265 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 FBXL8Q96CD0 374 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 DIRAS2Q96HU8 199 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 TMEM109Q9BVC6 243 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 MFRPQ9BY79 579 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 COQ3Q9NZJ6 369 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 DNAJC27Q9NZQ0 273 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 TPOP07202 933 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 MRPL3P09001 348 aaKnown RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 NKAPLQ5M9Q1 402 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 PRAMEF8Q5VWM4 474 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 PRAMEF7Q5VXH5 474 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 OR5T2Q8NGG2 359 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SGTBQ96EQ0 304 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 HDAC8Q9BY41 377 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 TRPV5Q9NQA5 729 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 IL17CQ9P0M4 197 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 UNC119BA6NIH7 251 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 HRGP04196 525 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 C1SP09871 688 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 HSD11B2P80365 405 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 C6orf52Q5T4I8 152 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
NEK1-201ENST00000439128 IQCKQ8N0W5 287 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 TMEM178AQ8NBL3 297 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 OSTF1Q92882 214 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 PYURFQ96I23 114 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 PRRX2Q99811 253 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 HS3ST3A1Q9Y663 406 aa11.51□□□□□ -0.57
NEK1-201ENST00000439128 SULT2B1O00204 365 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 TNFRSF21O75509 655 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 TNFSF15O95150 251 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 PRKCAP17252 672 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 TNFSF4P23510 183 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 ITGB8P26012 769 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 TLE3Q04726 772 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 HYAL1Q12794 435 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 PRICKLE2Q7Z3G6 844 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 APLFQ8IW19 511 aaPredicted RBP11.5□□□□□ -0.57
NEK1-201ENST00000439128 SCML4Q8N228 414 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 OR9A2Q8NGT5 310 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 RHEBL1Q8TAI7 183 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 C10orf82Q8WW14 230 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 GAL3ST3Q96A11 431 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 NANSQ9NR45 359 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 RHBDL2Q9NX52 303 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 ARPC2O15144 300 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 CREG1O75629 220 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 PSMB5P28074 263 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 FMO3P31513 532 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 SGSHP51688 502 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 CLDN10P78369 228 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 PTGR1Q14914 329 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 OR2T5Q6IEZ7 315 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 RAB11FIP2Q7L804 512 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 MAMDC2Q7Z304 686 aaPredicted RBP11.5□□□□□ -0.57
NEK1-201ENST00000439128 DENND6BQ8NEG7 585 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 OR2T29Q8NH02 315 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 OR51Q1Q8NH59 317 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 ZNF559Q9BR84 538 aa11.5□□□□□ -0.57
NEK1-201ENST00000439128 POLR2J2Q9GZM3 115 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms