RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SOHLH2Q9NX45 425 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 PRAMEF27A3QJZ7 478 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 G3V2T6 193 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 LDB3O75112 727 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 RDH16O75452 317 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 TFPTP0C1Z6 253 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 GNSP15586 552 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 CDH2P19022 906 aaPredicted RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 MYF6P23409 242 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 CDH15P55291 814 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 PCBP3P57721 371 aaKnown RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 LASP1Q14847 261 aaKnown RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 AMZ1Q400G9 498 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 SLC36A3Q495N2 470 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 ZC3H12BQ5HYM0 836 aaKnown RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 AP1ARQ63HQ0 302 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 ZDHHC13Q8IUH4 622 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 ARL10Q8N8L6 244 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 Q8N9G6 341 aaPredicted RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 GAB3Q8WWW8 586 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 POP5Q969H6 163 aaKnown RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 TMEM19Q96HH6 336 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 TRPC4Q9UBN4 977 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 RAB23Q9ULC3 237 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 UNC13CQ8NB66 2214 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 CCDC88CQ9P219 2028 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 RP1P56715 2156 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 HRO43593 1189 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 HMGN2P05204 90 aaKnown RBP19.86■□□□□ 0.77
PTPRF-207ENST00000436724 PRKACGP22612 351 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 PCSK6P29122 969 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 TLX1P31314 330 aaPredicted RBP19.86■□□□□ 0.77
PTPRF-207ENST00000436724 SLC5A2P31639 672 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 OR1E2P47887 323 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 ARRB1P49407 418 aaPredicted RBP19.86■□□□□ 0.77
PTPRF-207ENST00000436724 LAPTM4AQ15012 233 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 PLK5Q496M5 336 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 REEP3Q6NUK4 255 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 CCDC80Q76M96 950 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 OLIG3Q7RTU3 272 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 C1orf210Q8IVY1 113 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 OR4K14Q8NGD5 310 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 DOK4Q8TEW6 326 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 XAGE5Q8WWM1 108 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 ELP4Q96EB1 424 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 C16orf58Q96GQ5 468 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 C7orf34Q96L11 122 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 SOX17Q9H6I2 414 aaPredicted RBP19.86■□□□□ 0.77
PTPRF-207ENST00000436724 LYRM4Q9HD34 91 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 MS4A12Q9NXJ0 267 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 PILRBQ9UKJ0 227 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 ANGPT4Q9Y264 503 aa19.86■□□□□ 0.77
PTPRF-207ENST00000436724 E2F6O75461 281 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 SNAP29O95721 258 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 MATN1P21941 496 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 MLLT3P42568 568 aaPredicted RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 ARSFP54793 590 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 TUBA4AP68366 448 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 KCNAB1Q14722 419 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 MYBPC3Q14896 1274 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 IQCCQ4KMZ1 466 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 CRB2Q5IJ48 1285 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 ALDH16A1Q8IZ83 802 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 CA13Q8N1Q1 262 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 SIMC1Q8NDZ2 872 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 SPPL2AQ8TCT8 520 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 PIGKQ92643 395 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 AHCYL2Q96HN2 611 aaKnown RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 SMURF2Q9HAU4 748 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 A4GALTQ9NPC4 353 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 EQTNQ9NQ60 294 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 TMEM9Q9P0T7 183 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 TNRC6BQ9UPQ9 1833 aaKnown RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 IGHV1OR21-1A0A087WYE8 117 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 A0A0A6YYC8 382 aaPredicted RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 TLCD2A6NGC4 264 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 I3L1I5 382 aaPredicted RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 CYR61O00622 381 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 NUDT21O43809 227 aaKnown RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 DCTP40126 519 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 GABRA4P48169 554 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 CFHR1Q03591 330 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 SYPL1Q16563 259 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 PRTGQ2VWP7 1150 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 TMEM64Q6YI46 380 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 USP53Q70EK8 1073 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 TSEN54Q7Z6J9 526 aaKnown RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 LRRC25Q8N386 305 aaPredicted RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 BARD1Q99728 777 aaKnown RBP19.85■□□□□ 0.77
PTPRF-207ENST00000436724 ZSCAN32Q9NX65 697 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 CSNK1G3Q9Y6M4 447 aa19.85■□□□□ 0.77
PTPRF-207ENST00000436724 PRAMEF25A6NGN4 478 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 C5orf58C9J3I9 102 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 B4GAT1O43505 415 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 FGF17O60258 216 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 BMP10O95393 424 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 OR2T5Q6IEZ7 315 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 WDR53Q7Z5U6 358 aaPredicted RBP19.84■□□□□ 0.77
PTPRF-207ENST00000436724 OR2T29Q8NH02 315 aa19.84■□□□□ 0.77
PTPRF-207ENST00000436724 RSPO3Q9BXY4 272 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms