RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 FAM171A2A8MVW0 826 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 SAP18O00422 153 aaKnown RBP16.07■□□□□ 0.16
CNOT9-204ENST00000432877 TP73O15350 636 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 PHGDHO43175 533 aaKnown RBP16.07■□□□□ 0.16
CNOT9-204ENST00000432877 SH3BGRLO75368 114 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 ACSL3O95573 720 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 EPB42P16452 691 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 NRG3P56975 720 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 RAB10P61026 200 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 LTBQ06643 244 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 FASTKD3Q14CZ7 662 aaKnown RBP16.07■□□□□ 0.16
CNOT9-204ENST00000432877 ZKSCAN8Q15776 578 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-204ENST00000432877 LIPJQ5W064 366 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 HLA-DQA1Q5Y7H0 255 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 C18orf63Q68DL7 685 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 KLHL7Q8IXQ5 586 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 C17orf47Q8NEP4 570 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 HUS1BQ8NHY5 278 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 MBD3L2Q8NHZ7 208 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-204ENST00000432877 ZPLD1Q8TCW7 415 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 PYROXD1Q8WU10 500 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 UBTD2Q8WUN7 234 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 C18orf12Q96KH6 178 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 DACH2Q96NX9 599 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 SMYD2Q9NRG4 433 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 BEX4Q9NWD9 120 aaPredicted RBP16.07■□□□□ 0.16
CNOT9-204ENST00000432877 OPTCQ9UBM4 332 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 FETUBQ9UGM5 382 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 NPFFR2Q9Y5X5 522 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 ACANP16112 2415 aa16.07■□□□□ 0.16
CNOT9-204ENST00000432877 AKAP6Q13023 2319 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 CCDC189A1A4V9 331 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 PLPP1O14494 284 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 ZSCAN12O43309 604 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 GP5P40197 560 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 MASP1P48740 699 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 HNRNPH2P55795 449 aaKnown RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 EEF1A1P68104 462 aaKnown RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 PHEXP78562 749 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 EEF1A1P5Q5VTE0 462 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 SHEQ5VZ18 495 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 MRM1Q6IN84 353 aaKnown RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 ISCA2Q86U28 154 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 LINC01560Q8TB33 94 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 ABTB1Q969K4 478 aaPredicted RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 REPS1Q96D71 796 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 TMEM41AQ96HV5 264 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 RILPQ96NA2 401 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 ZFP3Q96NJ6 502 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 GNRHR2Q96P88 292 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 RBBP8Q99708 897 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 YIPF4Q9BSR8 244 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 SORBS1Q9BX66 1292 aaKnown RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 DDX31Q9H8H2 851 aaKnown RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 NMRAL1Q9HBL8 299 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 TRMT1Q9NXH9 659 aaKnown RBP16.06■□□□□ 0.16
CNOT9-204ENST00000432877 CAMK2AQ9UQM7 478 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 C15orf41Q9Y2V0 281 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 ASB4Q9Y574 426 aa16.06■□□□□ 0.16
CNOT9-204ENST00000432877 CLCA1A8K7I4 914 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 EFCAB8A8MWE9 144 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 ACTL6AO96019 429 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 CLPSP04118 112 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 BMP7P18075 431 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 SPRP35270 261 aaPredicted RBP16.05■□□□□ 0.16
CNOT9-204ENST00000432877 GCKP35557 465 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 CUL3Q13618 768 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 RCAN2Q14206 197 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 CYP20A1Q6UW02 462 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 WFDC11Q8NEX6 87 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 ISL2Q96A47 359 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 NTNG2Q96CW9 530 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 WDYHV1Q96HA8 205 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 TRIB1Q96RU8 372 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 UGT2B28Q9BY64 529 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 ALG9Q9H6U8 611 aa16.05■□□□□ 0.16
CNOT9-204ENST00000432877 A0A0A6YYD5 115 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 A0A1W2PR48 441 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 SYCE1LA8MT33 242 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 CXorf49A8MYA2 514 aaPredicted RBP16.04■□□□□ 0.16
CNOT9-204ENST00000432877 KDM4EB2RXH2 506 aaPredicted RBP16.04■□□□□ 0.16
CNOT9-204ENST00000432877 H0YIV9 168 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 CCDC188H7C350 402 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 EIF3HO15372 352 aaKnown RBP eCLIP16.04■□□□□ 0.16
CNOT9-204ENST00000432877 UGDHO60701 494 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 KERAO60938 352 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 LRATO95237 230 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 INHBBP09529 407 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 FAM58BPP0C7Q3 252 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 NR2F6P10588 404 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 NAGAP17050 411 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
CNOT9-204ENST00000432877 CASP3P42574 277 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 FBXW4P57775 412 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 DCAF7P61962 342 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 FUT7Q11130 342 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 DDX39BQ13838 428 aaKnown RBP16.04■□□□□ 0.16
CNOT9-204ENST00000432877 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 GRTP1Q5TC63 336 aa16.04■□□□□ 0.16
CNOT9-204ENST00000432877 FNDC7Q5VTL7 733 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms