RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KCTD7Q96MP8 289 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF559Q9BR84 538 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 TINF2Q9BSI4 451 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PIGMQ9H3S5 423 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SUV39H2Q9H5I1 410 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ELAC1Q9H777 363 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC6A20Q9NP91 592 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CISHQ9NSE2 258 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF226Q9NYT6 803 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SAMD4AQ9UPU9 718 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PCDHGA5Q9Y5G8 931 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PCDHGA1Q9Y5H4 931 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PTGDR2Q9Y5Y4 395 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CFAP20Q9Y6A4 193 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 A0A0G2JMZ2 1700 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 LRRC37A2A6NM11 1700 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ACOD1A6NK06 481 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MCIDASD6RGH6 385 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 H7C0S8 307 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 M0QYV0 167 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SSNA1O43805 119 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PRAMEF2O60811 474 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ICOSLGO75144 302 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SC5DO75845 299 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 C22orf31O95567 290 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 IGHV2-5P01817 119 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ALDOBP05062 364 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 EDN1P05305 212 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CBSLP0DN79 551 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CKBP12277 381 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 RNH1P13489 461 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CBSP35520 551 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 RGS4P49798 205 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PLK1P53350 603 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 FOXO1Q12778 655 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MLLT11Q13015 90 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PDZK1IP1Q13113 114 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CRHR2Q13324 411 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 LAPTM4AQ15012 233 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SPHARQ15513 63 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PCID2Q5JVF3 399 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SFRP5Q5T4F7 317 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 RNLSQ5VYX0 342 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ALKAL1Q6UXT8 129 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 TSPAN33Q86UF1 283 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CCDC117Q8IWD4 279 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MFSD6LQ8IWD5 586 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZNF561Q8N587 486 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MEIOBQ8N635 442 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CA5BP1Q8WTZ4 195 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 BRI3BPQ8WY22 251 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MS4A4EQ96PG1 132 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SERINC2Q96SA4 455 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SPSB2Q99619 263 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 SNRNP25Q9BV90 132 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 NLNQ9BYT8 704 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 ZDHHC5Q9C0B5 715 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MID1IP1Q9NPA3 183 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 RAD18Q9NS91 495 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 MS4A12Q9NXJ0 267 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 CARHSP1Q9Y2V2 147 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 PLEKHM1Q9Y4G2 1056 aa8.44□□□□□ -1.06
CDC42BPA-206ENST00000429440 METTL21EPA6NDL7 271 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM220BPB1ANY3 271 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 RTCAO00442 366 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 DPYSL4O14531 572 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SIGLEC5O15389 551 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GALR3O60755 368 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SLC19A2O60779 497 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 LINC00032P0C843 101 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 ADRB3P13945 408 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMEM11P17152 192 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 XPAP23025 273 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SIGLEC14Q08ET2 396 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 DPYSL2Q16555 572 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SGO1Q5FBB7 561 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 KRBOX4Q5JUW0 171 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 LIPJQ5W064 366 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 CYB5R2Q6BCY4 276 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GPR153Q6NV75 609 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 MZT2AQ6P582 158 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMEM91Q6ZNR0 172 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TMPRSS11FQ6ZWK6 438 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 KDELC2Q7Z4H8 507 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 COMTD1Q86VU5 262 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM217AQ8IXS0 508 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 SPATA22Q8NHS9 363 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 KLRG1Q96E93 195 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 P2RY11Q96G91 374 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 FAM193BQ96PV7 902 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 UBL7Q96S82 380 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 THUMPD3Q9BV44 507 aaKnown RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 HDHD2Q9H0R4 259 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 XKR8Q9H6D3 395 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 JPH1Q9HDC5 661 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 GPATCH2LQ9NWQ4 482 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 TAS2R16Q9NYV7 291 aa8.43□□□□□ -1.06
CDC42BPA-206ENST00000429440 COMMD3Q9UBI1 195 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms