RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 CCL22O00626 93 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 FABP3P05413 133 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 CD53P19397 219 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 SNRPEP62304 92 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 ALKBH1Q13686 389 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 NTRK2Q16620 822 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 CRTC2Q53ET0 693 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 HSDL2Q6YN16 418 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 ZNF527Q8NB42 609 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 OR52E6Q96RD3 313 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 NLE1Q9NVX2 485 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 GFOD1Q9NXC2 390 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 BACE2Q9Y5Z0 518 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 OR51F1A6NGY5 319 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 AIPO00170 330 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 GGT1P19440 569 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 SERINC3Q13530 473 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 RAB33AQ14088 237 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 RCAN2Q14206 197 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 PUM1Q14671 1186 aaKnown RBP eCLIP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 LIMS2Q7Z4I7 341 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 SPPL2AQ8TCT8 520 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 C12orf66Q96MD2 445 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 FXYD6Q9H0Q3 95 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 AGO1Q9UL18 857 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 YARS2Q9Y2Z4 477 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 OR14I1A6ND48 311 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 D6RAR5 112 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 DIRAS1O95057 198 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 PRPS2P11908 318 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 ETV5P41161 510 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 NR0B1P51843 470 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 RHOAP61586 193 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 KRT33BQ14525 404 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 PAGE3Q5JUK9 113 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 CNIH2Q6PI25 160 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 C16orf59Q7L2K0 433 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 DNAJB7Q7Z6W7 309 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 DDX53Q86TM3 631 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 ZFAND4Q86XD8 727 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 ELP5Q8TE02 316 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 KLHL15Q96M94 604 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 LRTM1Q9HBL6 345 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 KLHL1Q9NR64 748 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 NDRG2Q9UN36 371 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 PFKLP17858 780 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 TACR2P21452 398 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 RPS19P39019 145 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 CACNG1Q06432 222 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 CAMK2GQ13555 558 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 GTF2H2Q13888 395 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 MBTPS1Q14703 1052 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 C6orf136Q5SQH8 315 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 GTF2H2CQ6P1K8 395 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 SLITRK4Q8IW52 837 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 SORCS2Q96PQ0 1159 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 SLC25A13Q9UJS0 675 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 PURGQ9UJV8 347 aaKnown RBP13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 GPR45Q9Y5Y3 372 aa13.76□□□□□ -0.21
SYNGAP1-203ENST00000428982 A0A1B0GV90 55 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 MFSD2BA6NFX1 497 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 ABCD4O14678 606 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 CCL16O15467 120 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 HRO43593 1189 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 GREM1O60565 184 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 EIF1BO60739 113 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 CLDN11O75508 207 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 ADH1CP00326 375 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 ANXA5P08758 320 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 EIF1P41567 113 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 RAB4BP61018 213 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 PTCHD3Q3KNS1 767 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 PGBD2Q6P3X8 592 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 TSPAN33Q86UF1 283 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 ZDHHC1Q8WTX9 485 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 KCNJ9Q92806 393 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 TCRBV16S1A1N1A0A5B0 115 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 J3KR12 359 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 PIRTP0C851 137 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 PPIBP23284 216 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 CORO1AP31146 461 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 KCNJ3P48549 501 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 DEFB103AP81534 67 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 FGD2Q7Z6J4 655 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 NELL1Q92832 810 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 RAD51AP1Q96B01 352 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 PPP1R14DQ9NXH3 145 aa13.75□□□□□ -0.21
SYNGAP1-203ENST00000428982 MS4A12Q9NXJ0 267 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms