RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DYNC2LI1Q8TCX1 351 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 XAGE5Q8WWM1 108 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 ABTB1Q969K4 478 aaPredicted RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 LGALS12Q96DT0 336 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 SH3YL1Q96HL8 342 aaPredicted RBP12.94□□□□□ -0.34
THBS3-202ENST00000428962 BTBD2Q9BX70 525 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 AICDAQ9GZX7 198 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 KLHL31Q9H511 634 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 FGF22Q9HCT0 170 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 BCL2L10Q9HD36 194 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 FZD3Q9NPG1 666 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 PRDM7Q9NQW5 492 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 FAIMQ9NVQ4 179 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 ACAD8Q9UKU7 415 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 CHD7Q9P2D1 2997 aa12.94□□□□□ -0.34
THBS3-202ENST00000428962 ISM1B1AKI9 464 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 SLC31A1O15431 190 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 OR10H3O60404 316 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 CNOT3O75175 753 aaKnown RBP12.93□□□□□ -0.34
THBS3-202ENST00000428962 ERAL1O75616 437 aaKnown RBP12.93□□□□□ -0.34
THBS3-202ENST00000428962 CSNK2A2P19784 350 aaPredicted RBP12.93□□□□□ -0.34
THBS3-202ENST00000428962 PEBP1P30086 187 aaKnown RBP12.93□□□□□ -0.34
THBS3-202ENST00000428962 SLC19A1P41440 591 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 NUDT6P53370 316 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 LSM3P62310 102 aaKnown RBP12.93□□□□□ -0.34
THBS3-202ENST00000428962 TUBA1BP68363 451 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 SYPL1Q16563 259 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 RGS21Q2M5E4 152 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 ZNF425Q6IV72 752 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 PTCHD4Q6ZW05 846 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 USP30Q70CQ3 517 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 ZNF367Q7RTV3 350 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 AMIGO1Q86WK6 493 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 FBXL6Q8N531 539 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 VANGL1Q8TAA9 524 aaPredicted RBP12.93□□□□□ -0.34
THBS3-202ENST00000428962 ZNF675Q8TD23 568 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 LCN9Q8WX39 176 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 ZHX1-C8orf76Q96EF9 292 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 RIPOR3Q96MK2 946 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 Q96MT0 163 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 MS4A12Q9NXJ0 267 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 GPR83Q9NYM4 423 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.93□□□□□ -0.34
THBS3-202ENST00000428962 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
THBS3-202ENST00000428962 A0A1W2PR48 441 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 EPOPA6NHQ4 379 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 J3QRK9 145 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 AXIN1O15169 862 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 CASC3O15234 703 aaKnown RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 PPM1DO15297 605 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ZW10O43264 779 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 AIREO43918 545 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SLITRK5O94991 958 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 AIFM1O95831 613 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 CHRM5P08912 532 aaPredicted RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 FOSL2P15408 326 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ALDH4A1P30038 563 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 C21orf33P30042 268 aaPredicted RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 UGT2B10P36537 528 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 NCS1P62166 190 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 RPS15AP62244 130 aaKnown RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 ILKQ13418 452 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 NFATC4Q14934 902 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 NDUFA9Q16795 377 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 WASH2PQ6VEQ5 465 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 OR5D16Q8NGK9 328 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SLC22A18Q96BI1 424 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 COX4I2Q96KJ9 171 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 AKIP1Q9NQ31 210 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ERGIC3Q9Y282 383 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 A0A0G2JPF8 293 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 A0A1W2PRQ8 180 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 HNRNPCL2B2RXH8 293 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 HNRNPCL3B7ZW38 293 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 TLR4O00206 839 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 RPLP0P05388 317 aaKnown RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 STSP08842 583 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 HNRNPCL4P0DMR1 293 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ADORA3P0DMS8 318 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 PIPP12273 146 aaPredicted RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 F3P13726 295 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 CERS1P27544 350 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 POU1F1P28069 291 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 MPIP34949 423 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 CNR2P34972 360 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 PPP2CBP62714 309 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 PPP2CAP67775 309 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 RGS1Q08116 209 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ST3GAL4Q11206 333 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 IRF3Q14653 427 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 TJAP1Q5JTD0 557 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SLX4IPQ5VYV7 408 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms