RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 HNRNPKP61978 463 aaKnown RBP eCLIP10.84□□□□□ -0.67
CECR3-201ENST00000428828 SCN1BQ07699 218 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 TAB1Q15750 504 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 FAM83EQ2M2I3 478 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 HLA-BQ31612 363 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 BTBD16Q32M84 506 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 TECRLQ5HYJ1 363 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 METRNLQ641Q3 311 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 KDM4DQ6B0I6 523 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 LAMTOR1Q6IAA8 161 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 SLC23A3Q6PIS1 610 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 TSPYL5Q86VY4 417 aaPredicted RBP10.84□□□□□ -0.67
CECR3-201ENST00000428828 RASGRP3Q8IV61 690 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 DPP10Q8N608 796 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 GLB1L3Q8NCI6 653 aaPredicted RBP10.84□□□□□ -0.67
CECR3-201ENST00000428828 LOXL4Q96JB6 756 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 GPR137Q96N19 417 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 DCLRE1CQ96SD1 692 aaKnown RBP10.84□□□□□ -0.67
CECR3-201ENST00000428828 SECISBP2Q96T21 854 aaKnown RBP10.84□□□□□ -0.67
CECR3-201ENST00000428828 ELF4Q99607 663 aaPredicted RBP10.84□□□□□ -0.67
CECR3-201ENST00000428828 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 GAREM1Q9H706 876 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 RNF121Q9H920 327 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 IL1RL2Q9HB29 575 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 CAPN10Q9HC96 672 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 PTTG3PQ9NZH4 202 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 SLC6A14Q9UN76 642 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 PCDHB14Q9Y5E9 798 aa10.84□□□□□ -0.67
CECR3-201ENST00000428828 OR52A4PA6NMU1 304 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 B4DGG1 531 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 H3BUI4 141 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 CDC7O00311 574 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 FFAR2O15552 330 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PROM1O43490 865 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PIAS2O75928 621 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 SLCO2B1O94956 709 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PAHP00439 452 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 NCK1P16333 377 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 LBPP18428 481 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 TNNI3P19429 210 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 F8A1P23610 371 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 BDKRB1P46663 353 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 AP1S2P56377 157 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 NFKB2Q00653 900 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 COX10Q12887 443 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 HYAL2Q12891 473 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 RAPSNQ13702 412 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 ELOCQ15369 112 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 TSNQ15631 228 aaKnown RBP10.83□□□□□ -0.68
CECR3-201ENST00000428828 DEFB133Q30KQ1 61 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PROX2Q3B8N5 592 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 TIMM50Q3ZCQ8 353 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 CDH24Q86UP0 819 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 RNF130Q86XS8 419 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 SFTPA2Q8IWL1 248 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 SUMF1Q8NBK3 374 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 ZNF540Q8NDQ6 660 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 CNIH3Q8TBE1 160 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 GPBAR1Q8TDU6 330 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 ASB15Q8WXK1 588 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PTERQ96BW5 349 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 ZC3HAV1LQ96H79 300 aaKnown RBP10.83□□□□□ -0.68
CECR3-201ENST00000428828 C12orf66Q96MD2 445 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 SPATA9Q9BWV2 254 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 OR52A5Q9H2C5 316 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 DPEP2Q9H4A9 486 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 GSTO2Q9H4Y5 243 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 ACSS2Q9NR19 701 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 IMP3Q9NV31 184 aaKnown RBP10.83□□□□□ -0.68
CECR3-201ENST00000428828 TAAR2Q9P1P5 351 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 SPASTQ9UBP0 616 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 BTRCQ9Y297 605 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 KLHL20Q9Y2M5 609 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PCDHGA5Q9Y5G8 931 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 GPR179Q6PRD1 2367 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 PCM1Q15154 2024 aa10.83□□□□□ -0.68
CECR3-201ENST00000428828 LINC00854A0A1B0GVQ3 168 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 A0A1W2PRG6 482 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 A8MT66 165 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 B4DXG7 233 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 I3L521 148 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 IFRD1O00458 451 aaPredicted RBP10.82□□□□□ -0.68
CECR3-201ENST00000428828 KHNYNO15037 678 aaKnown RBP10.82□□□□□ -0.68
CECR3-201ENST00000428828 SEC22BO75396 215 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 FADS2O95864 444 aaKnown RBP10.82□□□□□ -0.68
CECR3-201ENST00000428828 CBSLP0DN79 551 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 ENGP17813 658 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 GADD45AP24522 165 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 CBSP35520 551 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 LIPAP38571 399 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 DCTP40126 519 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 KCNK10P57789 538 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.82□□□□□ -0.68
CECR3-201ENST00000428828 SCRN3Q0VDG4 424 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 GBX1Q14549 363 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 RABL3Q5HYI8 236 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 CLLU1Q5K131 121 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 PDZD3Q86UT5 571 aa10.82□□□□□ -0.68
CECR3-201ENST00000428828 GKN2Q86XP6 184 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms