RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 KRT16P08779 473 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 PTPN4P29074 926 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 FRKP42685 505 aaPredicted RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 TRPC1P48995 793 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 EFNA3P52797 238 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 PRR5P85299 388 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 BNIP1Q12981 228 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 TP53BP2Q13625 1128 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF267Q14586 743 aaPredicted RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 MLC1Q15049 377 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 TGIF1Q15583 401 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CEBPEQ15744 281 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 TBC1D25Q3MII6 688 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 SFT2D3Q587I9 215 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CPZQ66K79 652 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 C16orf89Q6UX73 402 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 RINLQ6ZS11 566 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 MED25Q71SY5 747 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANKRD37Q7Z713 158 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 VASH2Q86V25 355 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CLEC4FQ8N1N0 589 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 VWA5B2Q8N398 1253 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 DPP10Q8N608 796 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR5AK3PQ8NH89 298 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR14A16Q8NHC5 309 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 DNAJB8Q8NHS0 232 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 PNPT1Q8TCS8 783 aaKnown RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 ROPN1LQ96C74 230 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 AURKBQ96GD4 344 aaPredicted RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CGREF1Q99674 301 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC35A5Q9BS91 424 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR8D2Q9GZM6 311 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 PAIP1Q9H074 479 aaKnown RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CXorf36Q9H7Y0 433 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CXorf21Q9HAI6 301 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 EQTNQ9NQ60 294 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 SIRT3Q9NTG7 399 aaPredicted RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZCCHC3Q9NUD5 404 aaKnown RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 NDE1Q9NXR1 346 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 KCND3Q9UK17 655 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 FARSAQ9Y285 508 aaKnown RBP7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CLDN16Q9Y5I7 305 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 CLCA3PQ9Y6N3 262 aa7.4□□□□□ -1.22
HMGA1P4-201ENST00000428643 KMT2BQ9UMN6 2715 aaPredicted RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PCNX2A6NKB5 2137 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MDC1Q14676 2089 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 C15orf38-AP3S2A0A0A6YYH1 394 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 IGHV3-20A0A0C4DH32 117 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 GYG2O15488 501 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 EMC8O43402 210 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 COQ9O75208 318 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ATP5HO75947 161 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SEC24DO94855 1032 aaPredicted RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 IGHEP01854 428 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ADRB1P08588 477 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 T-ENOLP0DO92 83 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 LIFP15018 202 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 UQCRC2P22695 453 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MMP11P24347 488 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 CCT3P49368 545 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 RASSF2P50749 326 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC7A2P52569 658 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRKAG1P54619 331 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MTPNP58546 118 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 RPS26P62854 115 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC25A3Q00325 362 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF155Q12901 538 aaPredicted RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 BIKQ13323 160 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SPRED3Q2MJR0 410 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRICKLE4Q2TBC4 344 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 DNAL1Q4LDG9 190 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF628Q5EBL2 1059 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 LRIF1Q5T3J3 769 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 BHLHB9Q6PI77 547 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PAPD4Q6PIY7 484 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 FAM111BQ6SJ93 734 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 DLEU7Q6UYE1 221 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 HACD2Q6Y1H2 254 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 TMEM64Q6YI46 380 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 DGAT2L6Q6ZPD8 337 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF771Q7L3S4 317 aaPredicted RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 CPEB2Q7Z5Q1 589 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PPP1R32Q7Z5V6 425 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ARPINQ7Z6K5 226 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MRGPREQ86SM8 312 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 DTX1Q86Y01 620 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 RAB43Q86YS6 212 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MSRB3Q8IXL7 192 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 RBM15BQ8NDT2 890 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 PLPP5Q8NEB5 264 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR7G2Q8NG99 324 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR56A1Q8NGH5 318 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 FBXO30Q8TB52 745 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 SFXN5Q8TD22 340 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF675Q8TD23 568 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 JADE3Q92613 823 aa7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 DAZLQ92904 295 aaKnown RBP7.39□□□□□ -1.23
HMGA1P4-201ENST00000428643 MOAP1Q96BY2 351 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms