RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 AKAP7Q9P0M2 348 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 TMEM9Q9P0T7 183 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 C5AR2Q9P296 337 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 P2RX2Q9UBL9 471 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 KLHL3Q9UH77 587 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 RIMS3Q9UJD0 308 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PRDM4Q9UKN5 801 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 RARRES3Q9UL19 164 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 C19orf53Q9UNZ5 99 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SATB2Q9UPW6 733 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CLCA2Q9UQC9 943 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PCDHGB3Q9Y5G1 929 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SNX8Q9Y5X2 465 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 TDRD6O60522 2096 aaKnown RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 GLOD5A6NK44 160 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 H0Y3Z8 333 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CDX4O14627 284 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 FGF17O60258 216 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CBFA2T3O75081 653 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 DEAF1O75398 565 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PRSS23O95084 383 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 NTRK1P04629 796 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CD63P08962 238 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ETFAP13804 333 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 FBLP22087 321 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 FASP25445 335 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CSTF2P33240 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 FEN1P39748 380 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 NBL1P41271 181 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 STT3AP46977 705 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PTDSS1P48651 473 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 SEPHS1P49903 392 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CLCN2P51788 898 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 RAB15P59190 212 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 SNRPNP63162 240 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 SIM1P81133 766 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CDK6Q00534 326 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CHRNB3Q05901 458 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 SCARB2Q14108 478 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PRICKLE4Q2TBC4 344 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ZNF628Q5EBL2 1059 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 EXOSC6Q5RKV6 272 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 FHL5Q5TD97 284 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 MFSD12Q6NUT3 480 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CDC73Q6P1J9 531 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CEACAM20Q6UY09 585 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CYP2R1Q6VVX0 501 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 RBM44Q6ZP01 1051 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 LRRC74BQ6ZQY2 392 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 TTLL10Q6ZVT0 673 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CBLL1Q75N03 491 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 TMPRSS9Q7Z410 1059 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PPP1R3BQ86XI6 285 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 RNF130Q86XS8 419 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 KRT73Q86Y46 540 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CCDC116Q8IYX3 515 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CACTIN-AS1Q8N1I8 211 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PACRGLQ8N7B6 248 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 NUP43Q8NFH3 380 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 OR2I1PQ8NGU4 316 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 RHBDD1Q8TEB9 315 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 CANT1Q8WVQ1 401 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 LZICQ8WZA0 190 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 FIG4Q92562 907 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ANKRD9Q96BM1 317 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ART5Q96L15 291 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ZNF607Q96SK3 696 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 STACQ99469 402 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ACTRT3Q9BYD9 372 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 TRIM8Q9BZR9 551 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 B3GNT4Q9C0J1 378 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 SPRTNQ9H040 489 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 SLC26A1Q9H2B4 701 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 POLE3Q9NRF9 147 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PRTFDC1Q9NRG1 225 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 DUSP22Q9NRW4 184 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 AGPAT4Q9NRZ5 378 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 LANCL2Q9NS86 450 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 STARD5Q9NSY2 213 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 EXD2Q9NVH0 621 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ZNF639Q9UID6 485 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 NXT1Q9UKK6 140 aaKnown RBP8.51□□□□□ -1.05
NR1I3-209ENST00000428574 BOLA1Q9Y3E2 137 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 GON4LQ3T8J9 2241 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 PI4KAP42356 2102 aa8.51□□□□□ -1.05
NR1I3-209ENST00000428574 ADAMTS20P59510 1910 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 IGKV3D-11A0A0A0MRZ8 115 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 A0A0G2JPF8 293 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 FAM86C2PA6NEL3 165 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 ZNF860A6NHJ4 632 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 HNRNPCL2B2RXH8 293 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 HNRNPCL3B7ZW38 293 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 UPK1AO00322 258 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 HMGN4O00479 90 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 DYRK3O43781 588 aa8.5□□□□□ -1.05
NR1I3-209ENST00000428574 CPNE3O75131 537 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms