RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 NMRK1Q9NWW6 199 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TIMM22Q9Y584 194 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SPTAN1Q13813 2472 aaKnown RBP8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 DOCK10Q96BY6 2186 aa8.54□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 A0A1B0GUH1 482 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CYSRT1A8MQ03 144 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 KLRC4-KLRK1H3BQV0 150 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 UBFD1O14562 309 aaKnown RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PEX1O43933 1283 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PCDH7O60245 1069 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ZNF500O60304 480 aaPredicted RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 ZNF354AO60765 605 aaPredicted RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SLC19A2O60779 497 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GUCY1B2O75343 617 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 NUDT17P0C025 328 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SLC35E2P0CK97 266 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CPA3P15088 417 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 NT5EP21589 574 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SSTR4P31391 388 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PTGER1P34995 402 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 NAGLUP54802 743 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CASP6P55212 293 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 FOXA1P55317 472 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 HSF1Q00613 529 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CCDC153Q494R4 210 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 C6orf163Q5TEZ5 329 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 EMBQ6PCB8 327 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 FRMD7Q6ZUT3 714 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SLC29A4Q7RTT9 530 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SULF2Q8IWU5 870 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RIBC1Q8N443 379 aaPredicted RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 POGLUT1Q8NBL1 392 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 OR4K14Q8NGD5 310 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 RDH11Q8TC12 318 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SLC22A8Q8TCC7 542 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 KLHL29Q96CT2 875 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 APIPQ96GX9 242 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 APOPT1Q96IL0 206 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 FAIM2Q9BWQ8 316 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 EBPLQ9BY08 206 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SHCBP1LQ9BZQ2 653 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 WWTR1Q9GZV5 400 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 IQCGQ9H095 443 aaKnown RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 CXorf21Q9HAI6 301 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 DEPPQ9NTK1 212 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 VPS29Q9UBQ0 182 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PLEKHB1Q9UF11 243 aaPredicted RBP8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 TINAGQ9UJW2 476 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 GRID1Q9ULK0 1009 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 PCDHA9Q9Y5H5 950 aa8.53□□□□□ -1.04
RFX3-AS1-202ENST00000427722 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GNG14A0A1W2PPG7 69 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C1orf226A1L170 272 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 PINLYPA6NC86 204 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GOLGA6L10A6NI86 522 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNHIT1O43257 154 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 HS6ST1O60243 411 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CDC40O60508 579 aaKnown RBP eCLIP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZG16O60844 167 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ERAL1O75616 437 aaKnown RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CLPSP04118 112 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CCL3P10147 92 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CPMP14384 443 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ABOP16442 354 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DEKP35659 375 aaKnown RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FEN1P39748 380 aaKnown RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 XKP51811 444 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SLC37A1P57057 533 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DNAJB13P59910 316 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 PLGLB1Q02325 96 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SLC18A2Q05940 514 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 BTKQ06187 659 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ACSM2AQ08AH3 577 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 BIKQ13323 160 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ESPL1Q14674 2120 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 EBPQ15125 230 aaKnown RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C3AR1Q16581 482 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 IMPG1Q17R60 797 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 MPEG1Q2M385 716 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SPIN4Q56A73 249 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ACSM2BQ68CK6 577 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FAM180BQ6P0A1 224 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SLC48A1Q6P1K1 146 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 OPN5Q6U736 354 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C10orf107Q8IVU9 208 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SRRM1Q8IYB3 904 aaKnown RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GHDCQ8N2G8 530 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GBP7Q8N8V2 638 aaPredicted RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZFP62Q8NB50 900 aaPredicted RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CDC26Q8NHZ8 85 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CAVIN3Q969G5 261 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TM4SF18Q96CE8 201 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SPACA9Q96E40 222 aaPredicted RBP8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 BRINP2Q9C0B6 783 aa8.52□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GRIP2Q9C0E4 1043 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms