RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 DSC1Q08554 894 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ALG1LQ6GMV1 187 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 RETSATQ6NUM9 610 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 CASP12Q6UXS9 341 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 WASH2PQ6VEQ5 465 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FANK1Q8TC84 345 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 GTF3C2Q8WUA4 911 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 AHCYL2Q96HN2 611 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 LRR1Q96L50 414 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ATF6BQ99941 703 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 THAP7Q9BT49 309 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF416Q9BWM5 594 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC6A15Q9H2J7 730 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 IL20RAQ9UHF4 553 aa10.73□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM74A7A6NL05 159 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 ZAR1LA6NP61 321 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 CH25HO95992 272 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 HPXP02790 462 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 ALDOBP05062 364 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 PCSK2P16519 638 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 RAB3AP20336 220 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 GSTM5P46439 218 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TBX4P57082 545 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 MC1RQ01726 317 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 SERINC3Q13530 473 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 CAMK2DQ13557 499 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM74A3Q4VXF1 159 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC6A19Q695T7 634 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 OR8K3Q8NH51 312 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 FOXJ1Q92949 421 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 OR51J1Q9H342 316 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 LDAHQ9H6V9 325 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 FLRT1Q9NZU1 646 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 FTSJ1Q9UET6 329 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 DHRS7Q9Y394 339 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 MAB21L2Q9Y586 359 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 FFAR1O14842 300 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 DARSP14868 501 aaKnown RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 CHI3L1P36222 383 aaPredicted RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 HAAOP46952 286 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 LIM2P55344 173 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TSPAN5P62079 268 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 SIM1P81133 766 aaPredicted RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 DEFA5Q01523 94 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TSTA3Q13630 321 aaPredicted RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 BOP1Q14137 746 aaKnown RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 SF3A2Q15428 464 aaKnown RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 ST3GAL2Q16842 350 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 FAM110CQ1W6H9 321 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 IFI44LQ53G44 452 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 LYPD4Q6UWN0 246 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 MARCH9Q86YJ5 346 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 TTC9BQ8N6N2 239 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 OR52I1Q8NGK6 324 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 NEIL3Q8TAT5 605 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 HHIPL1Q96JK4 782 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 DMRTA2Q96SC8 542 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 ENAMQ9NRM1 1142 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 PTTG3PQ9NZH4 202 aa10.72□□□□□ -0.69
SEC61A1-202ENST00000424880 A0A0B4J203 849 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 hCG_1807616A0A1W2PRN6 198 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 PIP5K1CO60331 668 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 HCN1O60741 890 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 EGFP01133 1207 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 MT-ND4P03905 459 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 HSD3B1P14060 373 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC6A1P30531 599 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 PXNP49023 591 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 RPIAP49247 311 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 MVDP53602 400 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 FKBP1BP68106 108 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SCRN3Q0VDG4 424 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 EIF4EBP2Q13542 120 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 GRIN2CQ14957 1233 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 DUSP28Q4G0W2 176 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 HSDL2Q6YN16 418 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 DEF8Q6ZN54 512 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 LRRTM4Q86VH4 590 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 GPR135Q8IZ08 494 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 OR4A15Q8NGL6 344 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 HUS1BQ8NHY5 278 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 WNT2BQ93097 391 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 NXPE2Q96DL1 559 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SFXN2Q96NB2 322 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 DUSP26Q9BV47 211 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 NLNQ9BYT8 704 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 ARHGAP39Q9C0H5 1083 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SPRTNQ9H040 489 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 RANBP3Q9H6Z4 567 aaPredicted RBP10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 SLC25A19Q9HC21 320 aa10.71□□□□□ -0.69
SEC61A1-202ENST00000424880 PCDHB16Q9NRJ7 776 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms