RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 NTRK2Q16620 822 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 CTU2Q2VPK5 515 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 TIGD3Q6B0B8 471 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 DNAJC14Q6Y2X3 702 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 STAC2Q6ZMT1 411 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 RNF111Q6ZNA4 994 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 BEND4Q6ZU67 534 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 REXO1L1PQ8IX06 675 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 C9orf40Q8IXQ3 194 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 PALM2Q8IXS6 379 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 LINC01356Q8N9X3 169 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 TRPV3Q8NET8 790 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 NT5CQ8TCD5 201 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 FIG4Q92562 907 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 UBE2FQ969M7 185 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 DOCK7Q96N67 2140 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 ERGIC2Q96RQ1 377 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 TRMOQ9BU70 441 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 PINK1Q9BXM7 581 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 STMN4Q9H169 189 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 RASSF4Q9H2L5 321 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 UBQLN3Q9H347 655 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 UNKLQ9H9P5 680 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 FOLH1BQ9HBA9 442 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 CBLN4Q9NTU7 201 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 UVRAGQ9P2Y5 699 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 VTI1BQ9UEU0 232 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 ZFP69BQ9UJL9 534 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 GPR52Q9Y2T5 361 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 PMF1-BGLAPU3KQ54 211 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 SPACA6W5XKT8 324 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 NCKAP5O14513 1909 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 IGHV4-61A0A0C4DH41 118 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TRBC2A0A5B9 178 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 LRP5LA4QPB2 252 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 MROH6A6NGR9 719 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 H3BMM5 538 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 NDUFS8O00217 210 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ERI3O43414 337 aaKnown RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 RAMP1O60894 148 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CTNSO60931 367 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 LDB3O75112 727 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CDH16O75309 829 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ETHE1O95571 254 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 AVPP01185 164 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 H2AFZP0C0S5 128 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF23P17027 643 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TPSB2P20231 275 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CCND1P24385 295 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CDKN2BP42772 138 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 FABP6P51161 128 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 RPS13P62277 151 aaKnown RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CHRNB3Q05901 458 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 NAE1Q13564 534 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CUL1Q13616 776 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 RUNX2Q13950 521 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 PON3Q15166 354 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TPSAB1Q15661 275 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 STK11Q15831 433 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TSTD2Q5T7W7 516 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ALKBH5Q6P6C2 394 aaKnown RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 SLC22A25Q6T423 547 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 H2AFVQ71UI9 128 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 FAM214BQ7L5A3 538 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ADGRE4PQ86SQ3 457 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 SDCCAG8Q86SQ7 713 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 LINC00523Q86TU6 105 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 MUC15Q8N387 334 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF540Q8NDQ6 660 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TMEM52Q8NDY8 209 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 OR13J1Q8NGT2 312 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 OR2W6PQ8NHA6 318 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 FNDC9Q8TBE3 224 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 SPPL2AQ8TCT8 520 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 FBF1Q8TES7 1133 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 DOK4Q8TEW6 326 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF721Q8TF20 911 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 RBM18Q96H35 190 aaKnown RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 SENP5Q96HI0 755 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TMEM41AQ96HV5 264 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 HAUS8Q9BT25 410 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 G6PC3Q9BUM1 346 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 SUCNR1Q9BXA5 334 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 HEMGNQ9BXL5 484 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 TRIM2Q9C040 744 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 P2RY12Q9H244 342 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 KLHL31Q9H511 634 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 C12orf49Q9H741 205 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 DDX28Q9NUL7 540 aaKnown RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 MARCH4Q9P2E8 410 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 IKZF3Q9UKT9 509 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CLEC4AQ9UMR7 237 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 USP22Q9UPT9 525 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 DTX4Q9Y2E6 619 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 CRYL1Q9Y2S2 319 aa5.66□□□□□ -1.5
SDCBP-203ENST00000424270 IKBKGQ9Y6K9 419 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms