RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 STRADBQ9C0K7 418 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 RAB17Q9H0T7 212 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 P2RY12Q9H244 342 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 MVB12BQ9H7P6 319 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 COG4Q9H9E3 785 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 EPB41L5Q9HCM4 733 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 SLC40A1Q9NP59 571 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 AKAP7Q9P0M2 348 aaPredicted RBP2.38□□□□□ -2.03
VPS13A-208ENST00000423463 EPHA6Q9UF33 1036 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 SNX24Q9Y343 169 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 UTP11Q9Y3A2 253 aaKnown RBP2.38□□□□□ -2.03
VPS13A-208ENST00000423463 HEBP2Q9Y5Z4 205 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 PRSS21Q9Y6M0 314 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 RPS6KL1Q9Y6S9 549 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 COLEC10Q9Y6Z7 277 aa2.38□□□□□ -2.03
VPS13A-208ENST00000423463 CNOT1A5YKK6 2376 aaKnown RBP2.38□□□□□ -2.03
VPS13A-208ENST00000423463 LRRK1Q38SD2 2015 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 ZNF292O60281 2723 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 SLC5A10A0PJK1 596 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CTAGE15A4D2H0 777 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 SH2D7A6NKC9 451 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 C17orf100A8MU93 164 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 D6RAR5 112 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 E7ESA3 106 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 F5H0A9 414 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TNFRSF13BO14836 293 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TOX3O15405 576 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 RAD51CO43502 376 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 DUX1O43812 170 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 OR1I1O60431 355 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 GPC4O75487 556 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CBX6O95503 412 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 APOA4P06727 396 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PROS1P07225 676 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 GSTA2P09210 222 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 SLC35G4P0C7Q5 338 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CTAGE8P0CG41 777 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PRSS56P0CW18 603 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 HOXB9P17482 250 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 AMD1P17707 334 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PBLDP30039 288 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PGM1P36871 562 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 RPL21P46778 160 aaKnown RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 LIMK2P53671 638 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 P2RX3P56373 397 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 C2orf54Q08AI8 447 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 KRT33BQ14525 404 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TMED2Q15363 201 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TYSND1Q2T9J0 566 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PRICKLE4Q2TBC4 344 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 AMZ1Q400G9 498 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 SYTL3Q4VX76 610 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 SH2D4BQ5SQS7 431 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 FAAH2Q6GMR7 532 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PTRHD1Q6GMV3 140 aaKnown RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 WDR74Q6RFH5 385 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CES3Q6UWW8 571 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 FAM83HQ6ZRV2 1179 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 C1orf122Q6ZSJ8 110 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CYS1Q717R9 158 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CENPUQ71F23 418 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CTAGE6Q86UF2 777 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CTAGE4Q8IX94 777 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 OTUD6BQ8N6M0 293 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 OR4D9Q8NGE8 314 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 ASZ1Q8WWH4 475 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 ELMO1Q92556 727 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TFGQ92734 400 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 NXPE2Q96DL1 559 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TRIM51Q9BSJ1 452 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 WACQ9BTA9 647 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 IFT27Q9BW83 186 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 FAM129AQ9BZQ8 928 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 B3GNT4Q9C0J1 378 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PAIP1Q9H074 479 aaKnown RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 RAB33BQ9H082 229 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 WWP1Q9H0M0 922 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 OR52A5Q9H2C5 316 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 POLR1BQ9H9Y6 1135 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PNRC2Q9NPJ4 139 aaKnown RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 C20orf96Q9NUD7 363 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 INTS10Q9NVR2 710 aaKnown RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 MARCH4Q9P2E8 410 aaPredicted RBP2.37□□□□□ -2.03
VPS13A-208ENST00000423463 POLG2Q9UHN1 485 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 GNPTGQ9UJJ9 305 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 FBXO5Q9UKT4 447 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 PSMD13Q9UNM6 376 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 WDR37Q9Y2I8 494 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 RAP2CQ9Y3L5 183 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TEX264Q9Y6I9 313 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TMEM131Q92545 1883 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 MUC3AQ02505 3323 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 TRBV5-7A0A0A0MS05 114 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 FAM149AA5PLN7 773 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 OR52A4PA6NMU1 304 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 SLCO2B1O94956 709 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 C9P02748 559 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 RPN2P04844 631 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 CD9P21926 228 aa2.37□□□□□ -2.03
VPS13A-208ENST00000423463 ACADLP28330 430 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 379.4 ms