RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 UCKL1Q9NWZ5 548 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 RDH8Q9NYR8 311 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 WWOXQ9NZC7 414 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 FRRS1LQ9P0K9 344 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 NLKQ9UBE8 527 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 FTSJ1Q9UET6 329 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 NDRG2Q9UN36 371 aaKnown RBP6.6□□□□□ -1.35
CCR9-204ENST00000422395 FAM50BQ9Y247 325 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 NOSIPQ9Y314 301 aaKnown RBP6.6□□□□□ -1.35
CCR9-204ENST00000422395 CITO14578 2027 aa6.6□□□□□ -1.35
CCR9-204ENST00000422395 MYO7AQ13402 2215 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 IGLV3-10A0A075B6K4 115 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 MEIKINA0A087WXM9 373 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PRAMEF33A0A0G2JMD5 474 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 A0A1W2PPL8 197 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 RPS10-NUDT3A0A1W2PQS6 291 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 OR51F1A6NGY5 319 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 M0R233 179 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CLDN5O00501 218 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 INPPL1O15357 1258 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TREHO43280 583 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PI15O43692 258 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 UGDHO60701 494 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PRAMEF10O60809 474 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 RAMP2O60895 175 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TSC22D2O75157 780 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TMEM127O75204 238 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PPM1BO75688 479 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 BEST1O76090 585 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ARIH2O95376 493 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CSF2P04141 144 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 HLA-DPB1P04440 258 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 LGALS2P05162 132 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 MMP3P08254 477 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 OSMP13725 252 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CD53P19397 219 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 POU3F3P20264 500 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 KELP23276 732 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 MAOBP27338 520 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 EPHA2P29317 976 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 RBMS1P29558 406 aaKnown RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 RPL9P32969 192 aaKnown RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 SOX9P48436 509 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 MAN2A2P49641 1150 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 HNMTP50135 292 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CLCNKAP51800 687 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 HK3P52790 923 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PNLIPRP1P54315 467 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 WNT4P56705 351 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 SNRPD2P62316 118 aaKnown RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 PITPNAQ00169 270 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 DSC2Q02487 901 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TFF2Q03403 129 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CACNG1Q06432 222 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ACSM1Q08AH1 577 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 RAB40BQ12829 278 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 COX10Q12887 443 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 IL18Q14116 193 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ZNF273Q14593 569 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TRAM1Q15629 374 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ZNF630Q2M218 657 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 SLC39A12Q504Y0 691 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ARHGAP15Q53QZ3 475 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ZMAT1Q5H9K5 638 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ZNF57Q68EA5 555 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 FRMPD2BQ6IN97 320 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PDE12Q6L8Q7 609 aaKnown RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 TMEM81Q6P7N7 255 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TRIM40Q6P9F5 258 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CNIH2Q6PI25 160 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CD200R1LQ6Q8B3 271 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PAMR1Q6UXH9 720 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 USP30Q70CQ3 517 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 GLT6D1Q7Z4J2 308 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 HSD17B13Q7Z5P4 300 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 LRRC28Q86X40 367 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 PTOV1Q86YD1 416 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 OXR1Q8N573 874 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TP53I13Q8NBR0 393 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 CAMKVQ8NCB2 501 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PPTC7Q8NI37 304 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCR9-204ENST00000422395 PHOSPHO2Q8TCD6 241 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 SPPL2AQ8TCT8 520 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 EEF1AKMT1Q8WVE0 214 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 TRAPPC12Q8WVT3 735 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ST8SIA4Q92187 359 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 SMG7Q92540 1137 aaKnown RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 RFT1Q96AA3 541 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 UPRTQ96BW1 309 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 GIMAP5Q96F15 307 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ZBED6CLQ96FA7 236 aaPredicted RBP6.59□□□□□ -1.35
CCR9-204ENST00000422395 TPD52L3Q96J77 140 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 SEMA3CQ99985 751 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ACBD6Q9BR61 282 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 SLC6A17Q9H1V8 727 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 OR51J1Q9H342 316 aa6.59□□□□□ -1.35
CCR9-204ENST00000422395 ELOVL6Q9H5J4 265 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms