RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PRKNO60260 465 aaPredicted RBP14.65□□□□□ -0.06
BRAT1-202ENST00000421712 VPS4BO75351 444 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 PRPS2P11908 318 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 MPIP34949 423 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 PTGER1P34995 402 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 CASRP41180 1078 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 HK2P52789 917 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 MLF1P58340 268 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 RNF4P78317 190 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 OCRLQ01968 901 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 TLR1Q15399 786 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 PLEKHN1Q494U1 663 aaPredicted RBP14.65□□□□□ -0.06
BRAT1-202ENST00000421712 SLC6A19Q695T7 634 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 SLC29A4Q7RTT9 530 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 TMEM156Q8N614 296 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 PNPLA2Q96AD5 504 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 PPCDCQ96CD2 204 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 FCRL1Q96LA6 429 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 ZNF681Q96N22 645 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 NPAS2Q99743 824 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 SH3BP4Q9P0V3 963 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 MAP10Q9P2G4 905 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 BCAP29Q9UHQ4 241 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 CHD6Q8TD26 2715 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 BOD1L1Q8NFC6 3051 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 OR5H15A6NDH6 313 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 WWP2O00308 870 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 HDAC3O15379 428 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 ITGA10O75578 1167 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 ATP1B1P05026 303 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 CT62P0C5K7 136 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 DDX5P17844 614 aaKnown RBP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 NTSP30990 170 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 SSTR4P31391 388 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 NCBP2P52298 156 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 EMX2Q04743 252 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 LTB4RQ15722 352 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 HLA-DQA1Q5Y7H0 255 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 ANKRD26P1Q6NSI1 321 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 FAM111BQ6SJ93 734 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 C16orf47Q6ZP98 133 aaPredicted RBP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 R3HCC1LQ7Z5L2 792 aaKnown RBP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 WDR75Q8IWA0 830 aaKnown RBP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 LGI4Q8N135 537 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 VWA5B2Q8N398 1253 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 GAL3ST4Q96RP7 486 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 REEP4Q9H6H4 257 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 MEAF6Q9HAF1 191 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 NOP53Q9NZM5 478 aaKnown RBP14.64□□□□□ -0.07
BRAT1-202ENST00000421712 COL6A6A6NMZ7 2263 aa14.64□□□□□ -0.07
BRAT1-202ENST00000421712 GOLGA8QA0A0J9YX86 632 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 GOLGA8OA6NCC3 632 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 GOLGA8NF8WBI6 632 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 SUV39H1O43463 412 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 ATP8B1O43520 1251 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 SLC28A2O43868 658 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 OR2J2O76002 312 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 IGKV3-11P04433 115 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 LBPP18428 481 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 HPCAL1P37235 193 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 CD96P40200 585 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 SSR4P51571 173 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 DUSP2Q05923 314 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 MAP4K2Q12851 820 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 TUBA3CQ13748 450 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF169Q14929 603 aaPredicted RBP14.63□□□□□ -0.07
BRAT1-202ENST00000421712 PRICKLE4Q2TBC4 344 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 NXNQ6DKJ4 435 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 TUBA3EQ6PEY2 450 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 Q6ZS92 163 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 ZNF605Q86T29 641 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 FAM9CQ8IZT9 166 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 HORMAD2Q8N7B1 307 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 OR7G1Q8NGA0 311 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 OR9A2Q8NGT5 310 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 OR8K3Q8NH51 312 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 PIWIL2Q8TC59 973 aaKnown RBP14.63□□□□□ -0.07
BRAT1-202ENST00000421712 ASB15Q8WXK1 588 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 KAT2AQ92830 837 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 RNF32Q9H0A6 362 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 OR10A5Q9H207 317 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 LRFN1Q9P244 771 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 MYOTQ9UBF9 498 aa14.63□□□□□ -0.07
BRAT1-202ENST00000421712 EXO1Q9UQ84 846 aaKnown RBP14.63□□□□□ -0.07
BRAT1-202ENST00000421712 YARS2Q9Y2Z4 477 aaKnown RBP14.63□□□□□ -0.07
BRAT1-202ENST00000421712 TRAV17A0A0B4J275 112 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 OR6C76A6NM76 312 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 G6PDP11413 515 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 PCSK2P16519 638 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 RPL3P39023 403 aaKnown RBP14.62□□□□□ -0.07
BRAT1-202ENST00000421712 CYB561P49447 251 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 TNFSF10P50591 281 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 SLC37A1P57057 533 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 MRPS35P82673 323 aaKnown RBP14.62□□□□□ -0.07
BRAT1-202ENST00000421712 FUT7Q11130 342 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 PTGR1Q14914 329 aa14.62□□□□□ -0.07
BRAT1-202ENST00000421712 EXOSC7Q15024 291 aaKnown RBP14.62□□□□□ -0.07
BRAT1-202ENST00000421712 OR1C1Q15619 314 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms