RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NINQ8N4C6 2090 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 H3BN98 237 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 TNFRSF10BO14763 440 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 ADAM11O75078 769 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 NMBP08949 121 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 FGF2P09038 288 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 C4BPBP20851 252 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 XKP51811 444 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 TBX4P57082 545 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 CACNG1Q06432 222 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 FOXD4Q12950 439 aaPredicted RBP7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 SCARB2Q14108 478 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 ST3GAL2Q16842 350 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 SYT14P1Q58G82 188 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 COX20Q5RI15 118 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC25A30Q5SVS4 291 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 MIB1Q86YT6 1006 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 STPG2Q8N412 459 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 NEIL3Q8TAT5 605 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 SCRN2Q96FV2 425 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 SFXN2Q96NB2 322 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 ACBD6Q9BR61 282 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 FANCFQ9NPI8 374 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 ENAMQ9NRM1 1142 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 IMP3Q9NV31 184 aaKnown RBP7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 KIAA1671Q9BY89 1806 aa7.62□□□□□ -1.19
HMGXB4-202ENST00000418170 TRBV4-1A0A0J9YWV2 114 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 LINC01387J3KSC0 135 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SCAMP2O15127 329 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ACSL4O60488 711 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 B3GALNT1O75752 331 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 TGM6O95932 706 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 TRBC1P01850 177 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 GAS1P54826 345 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 RAG2P55895 527 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 GSG1Q2KHT4 349 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 WASH2PQ6VEQ5 465 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 OTOP2Q7RTS6 562 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 DGLUCYQ7Z3D6 616 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 METTL3Q86U44 580 aaKnown RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 IFNL1Q8IU54 200 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 VPS37AQ8NEZ2 397 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 NFKBIDQ8NI38 313 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 FANK1Q8TC84 345 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ADAMTS14Q8WXS8 1223 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ACOT12Q8WYK0 555 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 CHFRQ96EP1 664 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 MYO19Q96H55 970 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 FUBP3Q96I24 572 aaKnown RBP eCLIP7.61□□□□□ -1.196e-6■■■■□ 23.4
HMGXB4-202ENST00000418170 C12orf57Q99622 126 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 PKMYT1Q99640 499 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SARGQ9BW04 601 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 LATS2Q9NRM7 1088 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 DRGXA6NNA5 263 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 DNASE2O00115 360 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 INSIG1O15503 277 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 PRKYO43930 277 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 RECKO95980 971 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ANXA5P08758 320 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 PEPDP12955 493 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC6A4P31645 630 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 CHI3L1P36222 383 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 PTPN5P54829 565 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ZP1P60852 638 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 IGSF11Q5DX21 431 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 CRB2Q5IJ48 1285 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 GCNT6Q5T4J0 391 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 HACD4Q5VWC8 232 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 FRG2Q64ET8 278 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 CERS6Q6ZMG9 384 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 LRRC28Q86X40 367 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 L3MBTL4Q8NA19 623 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SLAIN1Q8ND83 568 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 OR5M3Q8NGP4 307 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 CDC26Q8NHZ8 85 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 FRG2BQ96QU4 278 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 OR4K3Q96R72 315 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ZCCHC4Q9H5U6 513 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 COPZ2Q9P299 210 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF282Q9UDV7 671 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 MGAT4BQ9UQ53 548 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 XIRP2A4UGR9 3374 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ANKRD66B4E2M5 251 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 FFAR1O14842 300 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 TLX2O43763 284 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 TOXO94900 526 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC25A14O95258 325 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 SLC25A27O95847 323 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 IFNA14P01570 189 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 IFNW1P05000 195 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF7P17097 686 aaPredicted RBP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 POLR2GP62487 172 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 COX10Q12887 443 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 MPEG1Q2M385 716 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 XKR6Q5GH73 641 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 CPTPQ5TA50 214 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 C17orf107Q6ZR85 190 aa7.61□□□□□ -1.19
HMGXB4-202ENST00000418170 KRT74Q7RTS7 529 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms