RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TMEM246Q9BRR3 403 aa17.05■□□□□ 0.32
SCARB1-203ENST00000415380 RMI1Q9H9A7 625 aa17.05■□□□□ 0.32
SCARB1-203ENST00000415380 NEUROD4Q9HD90 331 aa17.05■□□□□ 0.32
SCARB1-203ENST00000415380 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCARB1-203ENST00000415380 PLSCR3Q9NRY6 295 aa17.05■□□□□ 0.32
SCARB1-203ENST00000415380 KIF26AQ9ULI4 1882 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 PRAMEF27A3QJZ7 478 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 SMIM30A4D0T7 59 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 CCL16O15467 120 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 LRRTM2O43300 516 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 TMCC2O75069 709 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 GUCY1B2O75343 617 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 MMP11P24347 488 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 ACADLP28330 430 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 WEE1P30291 646 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 BSGP35613 385 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 PCBP4P57723 403 aaKnown RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 LSM11P83369 360 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 BNC1Q01954 994 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 NFE2L1Q14494 772 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 PDZK1Q5T2W1 519 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 ZNF547Q8IVP9 402 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 RDH10Q8IZV5 341 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 EXOSC8Q96B26 276 aaKnown RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 TCEAL4Q96EI5 215 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 RNF170Q96K19 258 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 COQ10AQ96MF6 247 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 NRTNQ99748 197 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 GDF15Q99988 308 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 TREX2Q9BQ50 279 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 ZDHHC5Q9C0B5 715 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 PAQR5Q9NXK6 330 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 TBC1D14Q9P2M4 693 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 NUFIP1Q9UHK0 495 aaKnown RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 MTCL1Q9Y4B5 1905 aaKnown RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 CENPBD1B2RD01 187 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 B4DXG7 233 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 SDC2P34741 201 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 MADCAM1Q13477 382 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 SLC35F1Q5T1Q4 408 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 LCTLQ6UWM7 567 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 ZER1Q7Z7L7 766 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 GDPD1Q8N9F7 314 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 RASSF5Q8WWW0 418 aa17.04■□□□□ 0.32
SCARB1-203ENST00000415380 RANGRFQ9HD47 186 aaPredicted RBP17.04■□□□□ 0.32
SCARB1-203ENST00000415380 CACNB4O00305 520 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-203ENST00000415380 TBX19O60806 448 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 APOL3O95236 402 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 TSPAN19P0C672 248 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 OR12D1P0DN82 309 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 SLC9A3P48764 834 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 METAP1P53582 386 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 RPS25P62851 125 aaKnown RBP17.03■□□□□ 0.32
SCARB1-203ENST00000415380 UAP1L1Q3KQV9 507 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 SLC25A30Q5SVS4 291 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 OR2G6Q5TZ20 316 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 VWA5B2Q8N398 1253 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 ANKRD53Q8N9V6 530 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 FGF11Q92914 225 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 FYTTD1Q96QD9 318 aaKnown RBP17.03■□□□□ 0.32
SCARB1-203ENST00000415380 GPA33Q99795 319 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 ZCCHC2Q9C0B9 1178 aaKnown RBP17.03■□□□□ 0.32
SCARB1-203ENST00000415380 TMEM245Q9H330 911 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 A0A1W2PRQ8 180 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 SEC14L5O43304 696 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 POP7O75817 140 aaKnown RBP17.03■□□□□ 0.32
SCARB1-203ENST00000415380 CSF2P04141 144 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 LAG3P18627 525 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 SSTR4P31391 388 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 GIPRP48546 466 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 GAS1P54826 345 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 WNT4P56705 351 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 DMPKQ09013 629 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 PYDC2Q56P42 97 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 DDI2Q5TDH0 399 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 HSDL2Q6YN16 418 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 OLIG3Q7RTU3 272 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 KIAA0907Q7Z7F0 614 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-203ENST00000415380 LAPTM4BQ86VI4 370 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 SYT14Q8NB59 555 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 SIMC1Q8NDZ2 872 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 OR4K5Q8NGD3 323 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 OR5AR1Q8NGP9 310 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 TM9SF4Q92544 642 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 KCTD7Q96MP8 289 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 ZSCAN32Q9NX65 697 aa17.03■□□□□ 0.32
SCARB1-203ENST00000415380 A0A0B4J293 547 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 AGRPO00253 132 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 KPNA3O00505 521 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-203ENST00000415380 SPINT1O43278 529 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 EPHX1P07099 455 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 MYL9P24844 172 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 FRKP42685 505 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-203ENST00000415380 CCT3P49368 545 aaKnown RBP17.02■□□□□ 0.32
SCARB1-203ENST00000415380 EFNB1P98172 346 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 TLE2Q04725 743 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 COX10Q12887 443 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 PLK5Q496M5 336 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 GPAT3Q53EU6 434 aa17.02■□□□□ 0.32
SCARB1-203ENST00000415380 RAET1GQ6H3X3 334 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms