RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PAK5Q9P286 719 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 RCOR3Q9P2K3 495 aaPredicted RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 PCDHA9Q9Y5H5 950 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 KLK4Q9Y5K2 254 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 ZFP37Q9Y6Q3 630 aaPredicted RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 FXYD1O00168 92 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 CACNB4O00305 520 aaPredicted RBP19.4■□□□□ 0.7
AP1S3-205ENST00000415298 MFSD11O43934 449 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 NPHS1O60500 1241 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 CRTAPO75718 401 aaPredicted RBP19.4■□□□□ 0.7
AP1S3-205ENST00000415298 HRGP04196 525 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 RAP2AP10114 183 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 MAGEA12P43365 314 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 FAM74A1Q5RGS3 127 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 ENTHD1Q8IYW4 607 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 MYADMQ96S97 322 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 DUSP26Q9BV47 211 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 TWSG1Q9GZX9 223 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 RIMS4Q9H426 269 aaPredicted RBP19.4■□□□□ 0.7
AP1S3-205ENST00000415298 ZNF222Q9UK12 451 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 ORC6Q9Y5N6 252 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 INMT-MINDY4F8WBC2 141 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 APOC4-APOC2K7ER74 178 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 UBE2CO00762 179 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 APOC2P02655 101 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 MAGEA3P43357 314 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 NAGLUP54802 743 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 RPS7P62081 194 aaKnown RBP19.4■□□□□ 0.7
AP1S3-205ENST00000415298 FOXM1Q08050 763 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 TBCEQ15813 527 aaPredicted RBP19.4■□□□□ 0.7
AP1S3-205ENST00000415298 AVPI1Q5T686 147 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 TMEM107Q6UX40 140 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 TPGS1Q6ZTW0 290 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 LHFPL3Q86UP9 236 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 PROSER1Q86XN7 944 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 SNX33Q8WV41 574 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 MIXL1Q9H2W2 232 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 OPA3Q9H6K4 179 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 FBXL21Q9UKT6 434 aa19.4■□□□□ 0.7
AP1S3-205ENST00000415298 HELZP42694 1942 aaKnown RBP19.39■□□□□ 0.69
AP1S3-205ENST00000415298 F5H5T6 163 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 STSP08842 583 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 RD3LP0DJH9 198 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 TAF1AQ15573 450 aaPredicted RBP19.39■□□□□ 0.69
AP1S3-205ENST00000415298 CMC1Q7Z7K0 106 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 SMRP1Q8NCR6 262 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 LPCAT1Q8NF37 534 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.39■□□□□ 0.69
AP1S3-205ENST00000415298 ASB16Q96NS5 453 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 SUV39H2Q9H5I1 410 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 SEC14L3Q9UDX4 400 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 NCKAP1Q9Y2A7 1128 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 IGLV3-10A0A075B6K4 115 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 A8MVJ9 347 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 TMEM233B4DJY2 109 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 PFKLP17858 780 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 ECH1Q13011 328 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 PRAMEF13Q5VWM6 474 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 BICRALQ6AI39 1079 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 ESRP1Q6NXG1 681 aaKnown RBP19.39■□□□□ 0.69
AP1S3-205ENST00000415298 ABCG8Q9H221 673 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 MED11Q9P086 117 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 FBXO10Q9UK96 956 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 NDRG4Q9ULP0 352 aaKnown RBP19.39■□□□□ 0.69
AP1S3-205ENST00000415298 PCDHB10Q9UN67 800 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 PCDHB9Q9Y5E1 797 aa19.39■□□□□ 0.69
AP1S3-205ENST00000415298 DRGXA6NNA5 263 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 MAGEA6P43360 314 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 ATP4BP51164 291 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 NUDT6P53370 316 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 CASP9P55211 416 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 NRG1Q02297 640 aaPredicted RBP19.38■□□□□ 0.69
AP1S3-205ENST00000415298 ZNF77Q15935 545 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 LBHQ53QV2 105 aaPredicted RBP19.38■□□□□ 0.69
AP1S3-205ENST00000415298 C3P1Q6ZMU1 363 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 AHSA2Q719I0 299 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 KANSL1Q7Z3B3 1105 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 FUNDC1Q8IVP5 155 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 DTD1Q8TEA8 209 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 ERMAPQ96PL5 475 aaPredicted RBP19.38■□□□□ 0.69
AP1S3-205ENST00000415298 DNAJB9Q9UBS3 223 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 CMAHPQ9Y471 501 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 WNT6Q9Y6F9 365 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 QSOX1O00391 747 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 KDM4BO94953 1096 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 NFKB1P19838 968 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 FAM98BQ52LJ0 330 aaKnown RBP19.38■□□□□ 0.69
AP1S3-205ENST00000415298 KLHL22Q53GT1 634 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 ANKRD34AQ69YU3 496 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 CLEC14AQ86T13 490 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 L3MBTL4Q8NA19 623 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 LRRC58Q96CX6 371 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 PEX11GQ96HA9 241 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 LGMNQ99538 433 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 NSMCE4AQ9NXX6 385 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 GPR160Q9UJ42 338 aa19.38■□□□□ 0.69
AP1S3-205ENST00000415298 LSM7Q9UK45 103 aaKnown RBP19.38■□□□□ 0.69
AP1S3-205ENST00000415298 H7C0S8 307 aa19.37■□□□□ 0.69
AP1S3-205ENST00000415298 WBP4O75554 376 aaKnown RBP19.37■□□□□ 0.69
AP1S3-205ENST00000415298 APRTP07741 180 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms