RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TNFRSF17Q02223 184 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 CAPRIN1Q14444 709 aaKnown RBP14.61□□□□□ -0.07
SHMT2-202ENST00000414700 DPY19L1Q2PZI1 675 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 FAM214AQ32MH5 1076 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 GTDC1Q4AE62 458 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 C6orf10Q5SRN2 563 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 C1orf189Q5VU69 101 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 GLRX5Q86SX6 157 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 ZNF420Q8TAQ5 688 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-202ENST00000414700 NDC1Q9BTX1 674 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 WDR41Q9HAD4 459 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 LYARQ9NX58 379 aaKnown RBP14.61□□□□□ -0.07
SHMT2-202ENST00000414700 CES1P1Q9UKY3 287 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 RARRES3Q9UL19 164 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 NEUROG3Q9Y4Z2 214 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 PCDHA9Q9Y5H5 950 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 OR2W5A6NFC9 320 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 CYR61O00622 381 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 NTRK1P04629 796 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 GSNP06396 782 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 NR2F6P10588 404 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 PTGER1P34995 402 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 E2F1Q01094 437 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 ART3Q13508 389 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 ERV3-1Q14264 604 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 ISXQ2M1V0 245 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 CDCP2Q5VXM1 449 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 DLEU7Q6UYE1 221 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 R3HCC1LQ7Z5L2 792 aaKnown RBP14.61□□□□□ -0.07
SHMT2-202ENST00000414700 ADAMTS16Q8TE57 1224 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 PEX11GQ96HA9 241 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 UTS2RQ9UKP6 389 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 WBP11Q9Y2W2 641 aaKnown RBP14.61□□□□□ -0.07
SHMT2-202ENST00000414700 AP4S1Q9Y587 144 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 PCDHGA1Q9Y5H4 931 aa14.61□□□□□ -0.07
SHMT2-202ENST00000414700 C1orf226A1L170 272 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 DYTNA2CJ06 578 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 ERAL1O75616 437 aaKnown RBP14.6□□□□□ -0.07
SHMT2-202ENST00000414700 CDC123O75794 336 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-202ENST00000414700 STAMBPO95630 424 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 GSTT2P0CG29 244 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 GSTT2BP0CG30 244 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 C8orf89P0DMQ9 161 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 PCSK2P16519 638 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 MSX2P35548 267 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-202ENST00000414700 GSTM5P46439 218 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 LIMK1P53667 647 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 CDH15P55291 814 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 RPS3AP61247 264 aaKnown RBP14.6□□□□□ -0.07
SHMT2-202ENST00000414700 DUSP2Q05923 314 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 NFYCQ13952 458 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 SLC48A1Q6P1K1 146 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 C16orf87Q6PH81 154 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 PPP1R3BQ86XI6 285 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 OR4N5Q8IXE1 308 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 TNIP2Q8NFZ5 429 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 DNAJB14Q8TBM8 379 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 STARD8Q92502 1023 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 MTERF3Q96E29 417 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 CNRIP1Q96F85 164 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-202ENST00000414700 DOK1Q99704 481 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 FAIM2Q9BWQ8 316 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 LYRM4Q9HD34 91 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 VAPAQ9P0L0 249 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 PHF11Q9UIL8 331 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 CLCA2Q9UQC9 943 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 PCDHGA7Q9Y5G6 932 aa14.6□□□□□ -0.07
SHMT2-202ENST00000414700 A0A1W2PNU3 283 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 TM4SF5O14894 197 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 LDB3O75112 727 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 JRKO75564 520 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 SCRG1O75711 98 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 DRD2P14416 443 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 PTPN6P29350 595 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 TTKP33981 857 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 ETV5P41161 510 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 BUD31P41223 144 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 ID2Q02363 134 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 COQ5Q5HYK3 327 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 HES3Q5TGS1 186 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 C8orf82Q6P1X6 216 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 MSRB3Q8IXL7 192 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 DPP10Q8N608 796 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 PCYOX1LQ8NBM8 494 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 LRRC58Q96CX6 371 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 BHLHE41Q9C0J9 482 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 RPF2Q9H7B2 306 aaKnown RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 FAM120CQ9NX05 1096 aaKnown RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 SLC25A37Q9NYZ2 338 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 AHCTF1Q8WYP5 2266 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 A0A1B0GX78 115 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 DSCR3O14972 297 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 POLR1CO15160 346 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 GUCY1B2O75343 617 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 CSO75390 466 aaKnown RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 SULT1C4O75897 302 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 ATE1O95260 518 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 C6orf47O95873 294 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 ABCB1P08183 1280 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms