RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NFKB1P19838 968 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 GPX3P22352 226 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 OR1E1P30953 314 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 ARHGDIAP52565 204 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 MFAP4P55083 255 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 UCP2P55851 309 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 EEFSECP57772 596 aaKnown RBP8.92□□□□□ -0.98
SNHG3-201ENST00000413987 RASGEF1BQ0VAM2 473 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 IL18Q14116 193 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 KIF19Q2TAC6 998 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF311Q5JNZ3 666 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 PLAC9Q5JTB6 97 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 PRSS36Q5K4E3 855 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.92□□□□□ -0.98
SNHG3-201ENST00000413987 WBP2NLQ6ICG8 309 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 PID1Q7Z2X4 250 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 WDR5BQ86VZ2 330 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 LYSMD2Q8IV50 215 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 CENPLQ8N0S6 344 aaPredicted RBP8.92□□□□□ -0.98
SNHG3-201ENST00000413987 CLEC4FQ8N1N0 589 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 GRPEL2Q8TAA5 225 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 WDR48Q8TAF3 677 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 SH3RF2Q8TEC5 729 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 RNF31Q96EP0 1072 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 WDFY2Q96P53 400 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 LRRC3BQ96PB8 259 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 KCTD14Q9BQ13 255 aaPredicted RBP8.92□□□□□ -0.98
SNHG3-201ENST00000413987 KCNS3Q9BQ31 491 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 FEM1AQ9BSK4 669 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 ZYG11BQ9C0D3 744 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 PRO3102Q9H379 93 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 DSN1Q9H410 356 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 PAK1IP1Q9NWT1 392 aaPredicted RBP8.92□□□□□ -0.98
SNHG3-201ENST00000413987 CMTM6Q9NX76 183 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 ZDHHC3Q9NYG2 299 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF221Q9UK13 617 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 CLEC4EQ9ULY5 219 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 RNF24Q9Y225 148 aa8.92□□□□□ -0.98
SNHG3-201ENST00000413987 TRAV19A0A0A6YYK7 116 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 PRAMEF27A3QJZ7 478 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SOX1O00570 391 aaPredicted RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SPRY1O43609 319 aaPredicted RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 TULP3O75386 442 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SUPT7LO94864 414 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 THBDP07204 575 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 GSTP1P09211 210 aaKnown RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SLC6A2P23975 617 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 AVPR1AP37288 418 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 HCAR3P49019 387 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SLC11A2P49281 568 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 TGM3Q08188 693 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 MAPK11Q15759 364 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 TSTD2Q5T7W7 516 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SNX29P2Q8IUI4 249 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 FUNDC1Q8IVP5 155 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 CMTM8Q8IZV2 173 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF567Q8N184 647 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 Q8N9G6 341 aaPredicted RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 CHDHQ8NE62 594 aaPredicted RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 DYNC2LI1Q8TCX1 351 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 BPIFB1Q8TDL5 484 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 CD300LFQ8TDQ1 290 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SELENOMQ8WWX9 145 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 RORBQ92753 470 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 NXNL1Q96CM4 212 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 LRRC58Q96CX6 371 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 GPR78Q96P69 363 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 CHID1Q9BWS9 393 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 P2RY12Q9H244 342 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 C12orf10Q9HB07 376 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 MRPS7Q9Y2R9 242 aaKnown RBP8.91□□□□□ -0.98
SNHG3-201ENST00000413987 FIS1Q9Y3D6 152 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 MYO15AQ9UKN7 3530 aa8.91□□□□□ -0.98
SNHG3-201ENST00000413987 IGLV3-10A0A075B6K4 115 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 A0A0U1RQV5 110 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PRSS38A1L453 326 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF561-AS1K7EIQ3 104 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 NR5A2O00482 541 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 NOBOXO60393 691 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CRYZL1O95825 349 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ALPLP05186 524 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PCMT1P22061 227 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 BMP8BP34820 402 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SOAT1P35610 550 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 VIPR2P41587 438 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 GPR4P46093 362 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 IST1P53990 364 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 EPHA5P54756 1037 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 GP2P55259 537 aaKnown RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CLDN8P56748 225 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 DEFA1P59665 94 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 DEFA3P59666 94 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SELENOVP59797 346 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SLC13A2Q13183 592 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SGCAQ16586 387 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PPP1R3AQ16821 1122 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ZIK1Q3SY52 487 aaPredicted RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 GCNT6Q5T4J0 391 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ADGRF1Q5T601 910 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms