RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 HPNP05981 417 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CTSSP25774 331 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SSTR1P30872 391 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GMPRP36959 345 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 MASP1P48740 699 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CDK9P50750 372 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TOMM20Q15388 145 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GRHL2Q6ISB3 625 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PACS2Q86VP3 889 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ZCCHC7Q8N3Z6 543 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 STAG3L4Q8TBR4 150 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CDKL2Q92772 493 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 C18orf12Q96KH6 178 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RILPQ96NA2 401 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GNRHR2Q96P88 292 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 MTERF1Q99551 399 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GPR22Q99680 433 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RBBP8Q99708 897 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CPNE1Q99829 537 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 YIPF4Q9BSR8 244 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ANGPTL4Q9BY76 406 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ALG9Q9H6U8 611 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PLEKHF2Q9H8W4 249 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 NEUROD4Q9HD90 331 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TEX10Q9NXF1 929 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ABCA2Q9BZC7 2435 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 DOCK7Q96N67 2140 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 A0A1B0GTL3 188 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 A0A1W2PR48 441 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CLCA1A8K7I4 914 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SUPT3HB4E1H0 165 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 K7EPI3 171 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SUPT3HO75486 399 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SNX4O95219 450 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EPB42P16452 691 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TCP1P17987 556 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 BMP7P18075 431 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ADSLP30566 484 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HOXC12P31275 282 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SSTR4P31391 388 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GALNSP34059 522 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 OPRM1P35372 400 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RAB10P61026 200 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RPS13P62277 151 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EIPR1Q53HC9 387 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 FNDC7Q5VTL7 733 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CYP20A1Q6UW02 462 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ISCA2Q86U28 154 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 MYLK4Q86YV6 388 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ZNF441Q8N8Z8 693 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PYROXD1Q8WU10 500 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 UCN3Q969E3 161 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TP53INP1Q96A56 240 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 UGT2B28Q9BY64 529 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 UBQLN3Q9H347 655 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SNX15Q9NRS6 342 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ASB4Q9Y574 426 aa13.03□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EXPH5Q8NEV8 1989 aa13.02□□□□□ -0.32
HLA-DQB2-229ENST00000411527 MBD3L4A6NDZ8 208 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MBD3L3A6NE82 208 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MBD3L5A6NJ08 208 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 UBXN8O00124 270 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 GNB5O14775 395 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TMPRSS11DO60235 418 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 EEDO75530 441 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 INHBBP09529 407 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 FAM58BPP0C7Q3 252 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SLC35E2BP0CK96 405 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SLC35E2P0CK97 266 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NR2F6P10588 404 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 BSGP35613 385 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CASP3P42574 277 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ARFIP1P53367 373 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DCAF7P61962 342 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 SORDQ00796 357 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DLG1Q12959 904 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 POU4F3Q15319 338 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 ZKSCAN8Q15776 578 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 NHSL2Q5HYW2 709 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 WIPI1Q5MNZ9 446 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 DCST1Q5T197 706 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MRM1Q6IN84 353 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 RAPH1Q70E73 1250 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 TEX9Q8N6V9 391 aa13.02□□□□□ -0.33
HLA-DQB2-229ENST00000411527 MBD3L2Q8NHZ7 208 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms