RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TMEM74BQ9NUR3 256 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ARL8BQ9NVJ2 186 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PAQR5Q9NXK6 330 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 EMC3Q9P0I2 261 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RCOR3Q9P2K3 495 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 IL36AQ9UHA7 158 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RAB26Q9ULW5 256 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SNX6Q9UNH7 406 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CA5BQ9Y2D0 317 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RAXQ9Y2V3 346 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 MAD1L1Q9Y6D9 718 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CHD5Q8TDI0 1954 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 GON4LQ3T8J9 2241 aa4.34□□□□□ -1.72
SF3B1-202ENST00000409915 FAM186AA6NE01 2351 aa4.34□□□□□ -1.72
SF3B1-202ENST00000409915 DNAH14Q0VDD8 3507 aa4.34□□□□□ -1.72
SF3B1-202ENST00000409915 PTPRZ1P23471 2315 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SPAG17Q6Q759 2223 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NUP205Q92621 2012 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PLXND1Q9Y4D7 1925 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 A0A087WV48 116 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 C15orf38-AP3S2A0A0A6YYH1 394 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 A0A0U1RQS6 177 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 C1orf232A0A0U1RR37 186 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 FAM95CA0A1B0GW59 222 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 BCLAF3A2AJT9 711 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SH3D21A4FU49 640 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NCF1BA6NI72 391 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NCF1CA8MVU1 366 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 EVPLLA8MZ36 301 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 E9PLN8 166 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 H0YJX3 145 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 hCG_2039718K7EN88 272 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 E2F3O00716 465 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ST8SIA3O43173 380 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PLRG1O43660 514 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GPRIN2O60269 458 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CST8O60676 142 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GMNNO75496 209 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 RHOBTB1O94844 696 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 KLHL18O94889 574 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SCAF4O95104 1147 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ZBTB11O95625 1053 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 POP4O95707 220 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 BCL10O95999 233 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 IGLV3-19P01714 112 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 PRNPP04156 253 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 HLA-DQB2P05538 268 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 IGHV4-34P06331 123 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 THRAP10827 490 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ICAM2P13598 275 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ADRB3P13945 408 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GYPEP15421 78 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ADRA2CP18825 462 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 HK1P19367 917 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ITGAXP20702 1163 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ACHEP22303 614 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GALP22466 123 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CTNNA2P26232 953 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CD27P26842 260 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 RRM2P31350 389 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TALDO1P37837 337 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CASRP41180 1078 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ARHGDIBP52566 201 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 MVDP53602 400 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 AP1S2P56377 157 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TAS2R38P59533 333 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 RAC3P60763 192 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ACTR3P61158 418 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SNRPD1P62314 119 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CDK16Q00536 496 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 OCA2Q04671 838 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 DUSP2Q05923 314 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 IL10RBQ08334 325 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 MZT1Q08AG7 82 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 OVGP1Q12889 678 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TRAF2Q12933 501 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 DDX39BQ13838 428 aaKnown RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GALNT3Q14435 633 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 IHHQ14623 411 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 C16orf72Q14CZ0 275 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 EFTUD2Q15029 972 aaKnown RBP eCLIP4.33□□□□□ -1.722e-6■■□□□ 13.7
SF3B1-202ENST00000409915 PTPRRQ15256 657 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CEBPEQ15744 281 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CYP2A13Q16696 494 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 KCTD19Q17RG1 926 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 NKPD1Q17RQ9 610 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 GTDC1Q4AE62 458 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 AARDQ4LEZ3 155 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TCHHL1Q5QJ38 904 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-202ENST00000409915 C1orf185Q5T7R7 199 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 FAM46CQ5VWP2 391 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 SEL1L3Q68CR1 1132 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 KIAA0895LQ68EN5 471 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 BICRALQ6AI39 1079 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 VASNQ6EMK4 673 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CCDC144NLQ6NUI1 221 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF529Q6P280 563 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 TEPPQ6URK8 271 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 CLEC9AQ6UXN8 241 aa4.33□□□□□ -1.72
SF3B1-202ENST00000409915 USP30Q70CQ3 517 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms