RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 MRIQ9BWK5 157 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SDHAF2Q9NX18 166 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 MN1Q10571 1320 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 DLX3O60479 287 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ADRB3P13945 408 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 PTH2RP49190 550 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CHRNA6Q15825 494 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ZNF585AQ6P3V2 769 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 LILRB2Q8N423 598 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CLDN22Q8N7P3 220 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 G6PC3Q9BUM1 346 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ACTL8Q9H568 366 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SNNO75324 88 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CD9P21926 228 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 GRM5P41594 1212 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 RAB1AP62820 205 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 TEX26Q8N6G2 289 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 OR1M1Q8NGA1 313 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CDK15Q96Q40 435 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CARS2Q9HA77 564 aaKnown RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ZBTB20Q9HC78 741 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ZBTB48P10074 688 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 TOR1AIP1Q5JTV8 583 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 PPP1R26Q5T8A7 1209 aaPredicted RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 C9orf57Q5W0N0 161 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 TMPRSS12Q86WS5 348 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 OR7D4Q8NG98 312 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CHRNA9Q9UGM1 479 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SLC7A11Q9UPY5 501 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SOCS2O14508 198 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 METTL15P1P0C7V9 234 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 JUPP14923 745 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SCAPQ12770 1279 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 C2orf15Q8WU43 125 aaKnown RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 PWWP2AQ96N64 755 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 ASAH2Q9NR71 780 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 CASP3P42574 277 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 GIPRP48546 466 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 TAS2R46P59540 309 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 SNRPD2P62316 118 aaKnown RBP12.37□□□□□ -0.43
COL6A3-206ENST00000409809 IL17RBQ9NRM6 502 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 DZANK1Q9NVP4 752 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 EPHA6Q9UF33 1036 aa12.37□□□□□ -0.43
COL6A3-206ENST00000409809 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 MAP2K4P45985 399 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 LIPJQ5W064 366 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 OR10K2Q6IF99 312 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 ZDHHC1Q8WTX9 485 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 FAM163AQ96GL9 167 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-206ENST00000409809 OSMRQ99650 979 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 ANGPTL7O43827 346 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 TGFB1P01137 390 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 GPR143P51810 404 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 HCCSP53701 268 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 ERVFC1P60507 584 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 TAP2Q03519 686 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 CCNJQ5T5M9 372 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 KLHDC1Q8N7A1 406 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 MTERF1Q99551 399 aaKnown RBP12.36□□□□□ -0.43
COL6A3-206ENST00000409809 ZNF286AQ9HBT8 521 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 COL3A1P02461 1466 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-206ENST00000409809 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 AMY2AP04746 511 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 RHOP08100 348 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 SPI1P17947 270 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 ZMAT1Q5H9K5 638 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 CRTC1Q6UUV9 634 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 UQCC3Q6UW78 93 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 POLHQ9Y253 713 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 WDR45Q9Y484 360 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 RNF215Q9Y6U7 377 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 ANKRD36CQ5JPF3 1778 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 AMHP03971 560 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 NAT1P18440 290 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 UBE2KP61086 200 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 DBPQ10586 325 aaPredicted RBP12.36□□□□□ -0.43
COL6A3-206ENST00000409809 CHAF1BQ13112 559 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 WSCD1Q658N2 575 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 THAP4Q8WY91 577 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 RAB3CQ96E17 227 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 METTL2AQ96IZ6 378 aaKnown RBP12.36□□□□□ -0.43
COL6A3-206ENST00000409809 A0A087WZY1 265 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 TCRBV7S2A1N4TA0A589 114 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 CYTIPO60759 359 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 CARD16Q5EG05 197 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 CD276Q5ZPR3 534 aa12.36□□□□□ -0.43
COL6A3-206ENST00000409809 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL6A3-206ENST00000409809 SERPINA9Q86WD7 417 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms