RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 C2orf92A0A1B0GVN3 265 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 TP53I11O14683 189 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 GUCY1B2O75343 617 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 GABRA1P14867 456 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 IGFBP2P18065 325 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 MSX1P28360 303 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 NR0B1P51843 470 aaKnown RBP13.58□□□□□ -0.24
CBX3-203ENST00000409747 NTRK2Q16620 822 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 PRAMEF20Q5VT98 475 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 HLA-DQA1Q5Y7H0 255 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 PLD6Q8N2A8 252 aaKnown RBP13.58□□□□□ -0.24
CBX3-203ENST00000409747 LRRC25Q8N386 305 aaPredicted RBP13.58□□□□□ -0.24
CBX3-203ENST00000409747 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 OR10G3Q8NGC4 313 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 OR4K14Q8NGD5 310 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 OR10Q1Q8NGQ4 319 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 C16orf45Q96MC5 204 aaPredicted RBP13.58□□□□□ -0.24
CBX3-203ENST00000409747 TTYH2Q9BSA4 534 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 DOHHQ9BU89 302 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 ELOVL6Q9H5J4 265 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 CXorf21Q9HAI6 301 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 ZNF180Q9UJW8 692 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.24
CBX3-203ENST00000409747 CHCHD2Q9Y6H1 151 aaPredicted RBP13.58□□□□□ -0.24
CBX3-203ENST00000409747 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 DNAJC13O75165 2243 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 TOXO94900 526 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 GBAP04062 536 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 CELA3AP09093 270 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 NRG3P56975 720 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 RPP38P78345 283 aaKnown RBP13.57□□□□□ -0.24
CBX3-203ENST00000409747 TFF3Q07654 80 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 TRAF3Q13114 568 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 RPS6KA2Q15349 733 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 CCDC71Q8IV32 467 aaPredicted RBP13.57□□□□□ -0.24
CBX3-203ENST00000409747 CLYBLQ8N0X4 340 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 LIX1Q8N485 282 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 MMGT1Q8N4V1 131 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 ZNF597Q96LX8 424 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 MRPL57Q9BQC6 102 aaKnown RBP13.57□□□□□ -0.24
CBX3-203ENST00000409747 MRPL46Q9H2W6 279 aaKnown RBP13.57□□□□□ -0.24
CBX3-203ENST00000409747 ACKR4Q9NPB9 350 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 SEMA4BQ9NPR2 832 aaPredicted RBP13.57□□□□□ -0.24
CBX3-203ENST00000409747 ZNF358Q9NW07 568 aa13.57□□□□□ -0.24
CBX3-203ENST00000409747 TEX10Q9NXF1 929 aaPredicted RBP13.57□□□□□ -0.24
CBX3-203ENST00000409747 OTCP00480 354 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 KLK1P06870 262 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 ZFP36L2P47974 494 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 GLE1Q53GS7 698 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 CCNYL2Q5T2Q4 361 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 C1orf185Q5T7R7 199 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 MILR1Q7Z6M3 343 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 ZNF441Q8N8Z8 693 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 C17orf47Q8NEP4 570 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 MYRIPQ8NFW9 859 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 OR7G1Q8NGA0 311 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 IFT81Q8WYA0 676 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 SECISBP2Q96T21 854 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 UCK2Q9BZX2 261 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 NPDC1Q9NQX5 325 aaPredicted RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 NMRK1Q9NWW6 199 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 CNOT11Q9UKZ1 510 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 SNX6Q9UNH7 406 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 FAM215AQ9Y5M1 114 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 HCFC1P51610 2035 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 CELSR1Q9NYQ6 3014 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 GOLGA6L10A6NI86 522 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 LRRC3CA6NJW4 275 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 WASHC1A8K0Z3 465 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 POC1B-GALNT4F8VUJ3 575 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 PGRMC2O15173 223 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 CLPSP04118 112 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 RPS17P08708 135 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 GLI4P10075 376 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 SSTR4P31391 388 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 MAPK12P53778 367 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 FUT7Q11130 342 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 UBAP2Q5T6F2 1119 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 TMEM198Q66K66 360 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 CDH24Q86UP0 819 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 DMRTC2Q8IXT2 367 aaPredicted RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 METTL4Q8N3J2 472 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 OR4F6Q8NGB9 312 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 TRPC4APQ8TEL6 797 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 DOK4Q8TEW6 326 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 DIO2Q92813 273 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 JSRP1Q96MG2 331 aaPredicted RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 NSUN5Q96P11 429 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 MRPL1Q9BYD6 325 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 BRF2Q9HAW0 419 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 ZBTB26Q9HCK0 441 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
CBX3-203ENST00000409747 DMGDHQ9UI17 866 aaKnown RBP13.56□□□□□ -0.24
CBX3-203ENST00000409747 C1orf226A1L170 272 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 SNX4O95219 450 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 CPMP14384 443 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms