RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 BHLHE41Q9C0J9 482 aaPredicted RBP13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 OR8D2Q9GZM6 311 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 IL1RL2Q9HB29 575 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SLC52A3Q9NQ40 469 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SLC6A13Q9NSD5 602 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 FBXL4Q9UKA2 621 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 ERVK-19Q9WJR5 959 aa13.17□□□□□ -0.3
CHRNA1-204ENST00000409323 FBP2O00757 339 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 TBX19O60806 448 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 IL6P05231 212 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 SNRPB2P08579 225 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 COX6A1P12074 109 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 MPIP34949 423 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 SOAT1P35610 550 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 PCOLCEQ15113 449 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 PRICKLE4Q2TBC4 344 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 C6orf10Q5SRN2 563 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 FAM91A1Q658Y4 838 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 GLB1L3Q8NCI6 653 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 OR7G2Q8NG99 324 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 ADAMTS17Q8TE56 1095 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 ZBED6CLQ96FA7 236 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 NPAS2Q99743 824 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 TRIM8Q9BZR9 551 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 CXorf36Q9H7Y0 433 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 CPNE5Q9HCH3 593 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 ARL8BQ9NVJ2 186 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 MAT2BQ9NZL9 334 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 CLCA3PQ9Y6N3 262 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 MED13Q9UHV7 2174 aa13.16□□□□□ -0.3
CHRNA1-204ENST00000409323 IGHV1-45A0A0A0MS14 117 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CAPN14A8MX76 684 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CBX6O95503 412 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 ATP1B1P05026 303 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CD63P08962 238 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 PRKAG1P54619 331 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 GAB1Q13480 694 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 TLR1Q15399 786 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CEBPEQ15744 281 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 MAPKAPK3Q16644 382 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 DPY19L1Q2PZI1 675 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 WDR53Q7Z5U6 358 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 GALNT12Q8IXK2 581 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 SLC2A12Q8TD20 617 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 OTUB1Q96FW1 271 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 LIN28AQ9H9Z2 209 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CXorf21Q9HAI6 301 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 SIRT3Q9NTG7 399 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 DKK4Q9UBT3 224 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 C19orf25Q9UFG5 118 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 MAPRE3Q9UPY8 281 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 LOC102723996A0A087X1L8 192 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 PRSS51A0A1B0GVH4 220 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 RNASET2O00584 256 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 COX4I1P13073 169 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 MGAT2Q10469 447 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CYLC2Q14093 348 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF628Q5EBL2 1059 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CPZQ66K79 652 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 REP15Q6BDI9 236 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 RAB43Q86YS6 212 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 VWA5B2Q8N398 1253 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 ZFP28Q8NHY6 868 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 FBXO30Q8TB52 745 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 PNPT1Q8TCS8 783 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 THAP3Q8WTV1 239 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 NCLNQ969V3 563 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 RCN3Q96D15 328 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 AURKBQ96GD4 344 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 ZNF764Q96H86 408 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 LPAR4Q99677 370 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 DPH1Q9BZG8 443 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 TRIM4Q9C037 500 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 EQTNQ9NQ60 294 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 FAM120CQ9NX05 1096 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 BCAP29Q9UHQ4 241 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 NDUFAF1Q9Y375 327 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 DMXL2Q8TDJ6 3036 aa13.15□□□□□ -0.3
CHRNA1-204ENST00000409323 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 NSG1A0A0A6YYJ2 146 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 A0A1W2PP18 115 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 SAGE2PA6NJ88 616 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
CHRNA1-204ENST00000409323 RFXANKO14593 260 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms