RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 VN1R3Q9BXE9 311 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CFL2Q9Y281 166 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 MAN2B2Q9Y2E5 1009 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CMAHPQ9Y471 501 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CHURC1-FNTBB4DL54 471 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TSPAN4O14817 238 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TGM5O43548 720 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 DOK2O60496 412 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 OR5F1O95221 314 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 IFNA14P01570 189 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 PPP2R1BP30154 601 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 HOXD11P31277 338 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 AHRP35869 848 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 POLR2LP62875 67 aaKnown RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 OC90Q02509 493 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 FCHO2Q0JRZ9 810 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 ZNF267Q14586 743 aaPredicted RBP7.91□□□□□ -1.14
SNX13-201ENST00000409076 TIMM50Q3ZCQ8 353 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CCDC58Q4VC31 144 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 AGAP6Q5VW22 663 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 RPTNQ6XPR3 784 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CHMP1BQ7LBR1 199 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 BBS1Q8NFJ9 593 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 SLC38A5Q8WUX1 472 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 C12orf66Q96MD2 445 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 CCDC115Q96NT0 180 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 AGAP4Q96P64 663 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TSPAN18Q96SJ8 248 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 SLX1AQ9BQ83 275 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 HOXD1Q9GZZ0 328 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 SAP130Q9H0E3 1048 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 TDP1Q9NUW8 608 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 DOCK4Q8N1I0 1966 aa7.91□□□□□ -1.14
SNX13-201ENST00000409076 A0A0G2JMZ2 1700 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 LRRC37A2A6NM11 1700 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SSNA1O43805 119 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 IGLV3-27P01718 113 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 GNSP15586 552 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ITGA2P17301 1181 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ETV5P41161 510 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ETV1P50549 477 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 RGS8P57771 180 aaPredicted RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 IFITM2Q01629 132 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SRSF5Q13243 272 aaKnown RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 KEAP1Q14145 624 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 LTB4RQ15722 352 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SSX1Q16384 188 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ARTNQ5T4W7 220 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 PODNL1Q6PEZ8 512 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 CNIH2Q6PI25 160 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 UNC5DQ6UXZ4 953 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 LIPIQ6XZB0 460 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 MACC1Q6ZN28 852 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 VRK2Q86Y07 508 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 KRT73Q86Y46 540 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 YIPF7Q8N8F6 280 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 GOLM1Q8NBJ4 401 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 FAM46DQ8NEK8 389 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 HRASLS5Q96KN8 279 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SLC35G5Q96KT7 338 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 FOXN4Q96NZ1 517 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SERHL2Q9H4I8 314 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 GULP1Q9UBP9 304 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 DPP7Q9UHL4 492 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 CA5BQ9Y2D0 317 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 A0A1B0GVT2 93 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 J3QLW9 94 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 GRM6O15303 877 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 GATBO75879 557 aaKnown RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 CSF2RAP15509 400 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ZNF19P17023 458 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 KELP23276 732 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 NAA10P41227 235 aaPredicted RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 CCR2P41597 374 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ASMTP46597 345 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 DCDC1P59894 354 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 RBBP4Q09028 425 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 POU4F3Q15319 338 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 PNCKQ6P2M8 343 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 METAP1DQ6UB28 335 aaPredicted RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 SERPINA11Q86U17 422 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 CDH24Q86UP0 819 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SAMD12Q8N8I0 201 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 KREMEN2Q8NCW0 462 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 OR13C5Q8NGS8 318 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ZNF671Q8TAW3 534 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SLC5A11Q8WWX8 675 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 TFGQ92734 400 aaPredicted RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 GLYATL1Q969I3 302 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 TMEM80Q96HE8 168 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 FRMD6Q96NE9 622 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 SECISBP2Q96T21 854 aaKnown RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 C1QTNF6Q9BXI9 259 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 ACER3Q9NUN7 267 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 FBXL12Q9NXK8 326 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 OSGIN1Q9UJX0 560 aa7.9□□□□□ -1.14
SNX13-201ENST00000409076 NDRG2Q9UN36 371 aaKnown RBP7.9□□□□□ -1.14
SNX13-201ENST00000409076 A0A075B6Q4 140 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 NDUFS4O43181 175 aa7.9□□□□□ -1.15
SNX13-201ENST00000409076 PIP5K1CO60331 668 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms