RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
RNF43-201ENST00000407977 CHPT1Q8WUD6 406 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 LRIG1Q96JA1 1093 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 AGAP4Q96P64 663 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 HDHD5Q9BXW7 423 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 PPA2Q9H2U2 334 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 PTGES2Q9H7Z7 377 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 TNFP01375 233 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 IFNA4P05014 189 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 AMY2BP19961 511 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 ACRV1P26436 265 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 CASRP41180 1078 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 MTFR2Q6P444 385 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 C6orf120Q7Z4R8 191 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 CNTNAP3BQ96NU0 1288 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 C17orf62Q9BQA9 187 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 B4GALT6Q9UBX8 382 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 LOC285095A0A1B0GVY8 99 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 F8W036 122 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
RNF43-201ENST00000407977 BEST1O76090 585 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 C8orf89P0DMQ9 161 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 PRKACAP17612 351 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 IGFBP4P22692 258 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 MLLT10P55197 1068 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 OR8K3Q8NH51 312 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 PELOQ9BRX2 385 aaKnown RBP12.4□□□□□ -0.42
RNF43-201ENST00000407977 MKRN2Q9H000 416 aaKnown RBP12.4□□□□□ -0.42
RNF43-201ENST00000407977 XYLT2Q9H1B5 865 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 CLEC4EQ9ULY5 219 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 MYOM1P52179 1685 aa12.4□□□□□ -0.42
RNF43-201ENST00000407977 RAB11BQ15907 218 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 MICAQ29983 383 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 SPARTQ8N0X7 666 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 OR52P1PQ8NH57 321 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 TMIGD2Q96BF3 282 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 SGTBQ96EQ0 304 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 ADH5P11766 374 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 AGXTP21549 392 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 AK4P27144 223 aaPredicted RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 CAMLGP49069 296 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ZNF41P51814 821 aaPredicted RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 MS4A2Q01362 244 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ZNF616Q08AN1 781 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 NRSN1Q8IZ57 195 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 LNX2Q8N448 690 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 TRAM1L1Q8N609 369 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 SLC5A8Q8N695 610 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 BEST4Q8NFU0 473 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ZNF436Q9C0F3 470 aaPredicted RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 GPR89AB7ZAQ6 455 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 G3V2L1 256 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 TGM6O95932 706 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 GPR89BP0CG08 455 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 CRHR2Q13324 411 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ZER1Q7Z7L7 766 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ZNF283Q8N7M2 679 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 KLRF1Q9NZS2 232 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 C3P01024 1663 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 TFP02787 698 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 CNR2P34972 360 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ACVR1BP36896 505 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 SNRPD2P62316 118 aaKnown RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 PLAG1Q6DJT9 500 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 BORCS8Q96FH0 119 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 TEX10Q9NXF1 929 aaPredicted RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 CNOT2Q9NZN8 540 aaKnown RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 DIRAS3O95661 229 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 TCEA1P23193 301 aaKnown RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 RIDAP52758 137 aaKnown RBP12.39□□□□□ -0.43
RNF43-201ENST00000407977 SH3BP2P78314 561 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 KRBOX4Q5JUW0 171 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 SPATC1Q76KD6 591 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 DBF4BQ8NFT6 615 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 ELMOD3Q96FG2 381 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 PCTPQ9UKL6 214 aa12.39□□□□□ -0.43
RNF43-201ENST00000407977 MYO5BQ9ULV0 1848 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 A0A1W2PRU2 124 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 C9J4A7 227 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 F5H5P2 479 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 FCER2P06734 321 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 CEP68Q76N32 757 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 DCP2Q8IU60 420 aaKnown RBP12.38□□□□□ -0.43
RNF43-201ENST00000407977 ARHGAP12Q8IWW6 846 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 OR4K5Q8NGD3 323 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 OR6C4Q8NGE1 309 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 NRG4Q8WWG1 115 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 SYT3Q9BQG1 590 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 SLC7A11Q9UPY5 501 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 CACNG2Q9Y698 323 aa12.38□□□□□ -0.43
RNF43-201ENST00000407977 HYKKA2RU49 373 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms