RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 UNC13CQ8NB66 2214 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 IGF2RP11717 2491 aa19.75■□□□□ 0.75
TPM1-208ENST00000404484 A0A0A6YYC8 382 aaPredicted RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 I3L1I5 382 aaPredicted RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 HNRNPRO43390 633 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 CHST10O43529 356 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 TNFRSF21O75509 655 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 XKP51811 444 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ITGA1P56199 1179 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 TXNL4AP83876 142 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 PRR5P85299 388 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ADRM1Q16186 407 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 FAM98BQ52LJ0 330 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 INTS11Q5TA45 600 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 C6orf120Q7Z4R8 191 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 OR5T3Q8NGG3 340 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 GATA6Q92908 595 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 SPRTNQ9H040 489 aaPredicted RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 YY1AP1Q9H869 796 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 A0A1W2PQM1 296 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 WASHC1A8K0Z3 465 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 A8MU76 341 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 FOXS1O43638 330 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 SLITRK5O94991 958 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 FHP07954 510 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ETFAP13804 333 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 DSTNP60981 165 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ACY1Q03154 408 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 GPR19Q15760 415 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ZNF630Q2M218 657 aaPredicted RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 COX20Q5RI15 118 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 PAPD5Q8NDF8 572 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 SLCO4A1Q96BD0 722 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 SLC35G5Q96KT7 338 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 CUTCQ9NTM9 273 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ZCCHC3Q9NUD5 404 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 DCAF13Q9NV06 445 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 GPATCH2Q9NW75 528 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 RPS6KA6Q9UK32 745 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 ATXN7L1Q9ULK2 861 aaPredicted RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 CDC14AQ9UNH5 594 aa19.74■□□□□ 0.75
TPM1-208ENST00000404484 SAMD4AQ9UPU9 718 aaKnown RBP19.74■□□□□ 0.75
TPM1-208ENST00000404484 MAP1BP46821 2468 aaKnown RBP19.73■□□□□ 0.75
TPM1-208ENST00000404484 C1QTNF9BB2RNN3 333 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 EMC8O43402 210 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 DNAJB6O75190 326 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 BMP10O95393 424 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 GPR75O95800 540 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 C1QCP02747 245 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 C1QTNF9P0C862 333 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 C8orf89P0DMQ9 161 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 CPMP14384 443 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 PORP16435 677 aaPredicted RBP19.73■□□□□ 0.75
TPM1-208ENST00000404484 ARSFP54793 590 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 TARDBPQ13148 414 aaKnown RBP eCLIP19.73■□□□□ 0.75
TPM1-208ENST00000404484 TP53BP2Q13625 1128 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 RNF145Q96MT1 663 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 NDC1Q9BTX1 674 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 SYNDIG1Q9H7V2 258 aa19.73■□□□□ 0.75
TPM1-208ENST00000404484 H3BMH7 237 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 CASQ2O14958 399 aaPredicted RBP19.72■□□□□ 0.75
TPM1-208ENST00000404484 MT-CO3P00414 261 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 IFI6P09912 130 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 FOLH1Q04609 750 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 CHRNB3Q05901 458 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 CAMK2BQ13554 666 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 CDCP2Q5VXM1 449 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 CEACAM20Q6UY09 585 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 RNF111Q6ZNA4 994 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 SZRD1Q7Z422 152 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 ARHGAP22Q7Z5H3 698 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 ZNF595Q8IYB9 648 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 CATSPER1Q8NEC5 780 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 PPWD1Q96BP3 646 aaKnown RBP19.72■□□□□ 0.75
TPM1-208ENST00000404484 MMABQ96EY8 250 aaPredicted RBP19.72■□□□□ 0.75
TPM1-208ENST00000404484 MAGIXQ9H6Y5 334 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 FGF21Q9NSA1 209 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 RIMS3Q9UJD0 308 aa19.72■□□□□ 0.75
TPM1-208ENST00000404484 TMEM247A6NEH6 219 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 MED26O95402 600 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 SERPINA1P01009 418 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 RAP2AP10114 183 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 ARAFP10398 606 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 FOLR1P15328 257 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 KHKP50053 298 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 TRIP10Q15642 601 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 ZNF750Q32MQ0 723 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 ZNF574Q6ZN55 896 aaPredicted RBP19.71■□□□□ 0.75
TPM1-208ENST00000404484 OR9A2Q8NGT5 310 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 OR1L3Q8NH93 324 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 TBC1D20Q96BZ9 403 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 ELP4Q96EB1 424 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 GFM1Q96RP9 751 aaKnown RBP19.71■□□□□ 0.75
TPM1-208ENST00000404484 PKP2Q99959 881 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 HCN3Q9P1Z3 774 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 ANGPT4Q9Y264 503 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 ZNF451Q9Y4E5 1061 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 EPG5Q9HCE0 2579 aa19.71■□□□□ 0.75
TPM1-208ENST00000404484 IGHV5-10-1A0A0J9YXX1 117 aa19.7■□□□□ 0.74
TPM1-208ENST00000404484 CLDN4O14493 209 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms