RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SCN1BQ07699 218 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 LARS2Q15031 903 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 DHCR24Q15392 516 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF362Q5T0B9 420 aaPredicted RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 HSDL2Q6YN16 418 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 FAM83HQ6ZRV2 1179 aaPredicted RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 USP30Q70CQ3 517 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 RBM45Q8IUH3 476 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TFGQ92734 400 aaPredicted RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 RGMAQ96B86 450 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 FNDC11Q9BVV2 318 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 ISYNA1Q9NPH2 558 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TAC3Q9UHF0 121 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 PLAGL1Q9UM63 463 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 SLC9A8Q9Y2E8 581 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 IRAK3Q9Y616 596 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 FAM172BPA6NC97 362 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 SNTNA6NMZ2 147 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 SSX4O60224 188 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 GSTM3P21266 225 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 OPRD1P41143 372 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 GIPRP48546 466 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 NKX2-5P52952 324 aaPredicted RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF79Q15937 498 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 C3orf38Q5JPI3 329 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 LIPKQ5VXJ0 399 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 C1orf94Q6P1W5 598 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 PODNL1Q6PEZ8 512 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 XKRXQ6PP77 449 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 LAX1Q8IWV1 398 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 OR52I1Q8NGK6 324 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 OR5K2Q8NHB8 316 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 BBS10Q8TAM1 723 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 OR8D1Q8WZ84 308 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 EXOSC8Q96B26 276 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 ARRDC3Q96B67 414 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TRMT61AQ96FX7 289 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 MSLNLQ96KJ4 702 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 SLC35G5Q96KT7 338 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 ABCG4Q9H172 646 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TMEM245Q9H330 911 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TP63Q9H3D4 680 aaPredicted RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TMEM39AQ9NV64 488 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TXNL4BQ9NX01 149 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TESQ9UGI8 421 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 SLC27A6Q9Y2P4 619 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 PRKYO43930 277 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 CDRT1O95170 752 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 OR12D1P0DN82 309 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 NR2F1P10589 423 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 IL7P13232 177 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ADRB3P13945 408 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 DRD2P14416 443 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 DDOSTP39656 456 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SMSP52788 366 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 EFNB1P98172 346 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 CDK5Q00535 292 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 PIN1Q13526 163 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 GNA13Q14344 377 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SYPL1Q16563 259 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 BAK1Q16611 211 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 GLYR1Q49A26 553 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 TMEM52BQ4KMG9 183 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SYT14P1Q58G82 188 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ENTPD8Q5MY95 495 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 C1orf53Q5VUE5 145 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ERN2Q76MJ5 926 aaKnown RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 WDR53Q7Z5U6 358 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 AMZ2Q86W34 360 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 C2orf73Q8N5S3 287 aaPredicted RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 OR4K5Q8NGD3 323 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 NELL2Q99435 816 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 MED18Q9BUE0 208 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 MCOLN1Q9GZU1 580 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 OR51I1Q9H343 314 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 MVB12BQ9H7P6 319 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 BCL2L10Q9HD36 194 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 LHX9Q9NQ69 397 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 N6AMT1Q9Y5N5 214 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 KIAA1549LQ6ZVL6 1849 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 WWP2O00308 870 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SEC14L5O43304 696 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 IDH3BO43837 385 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 FKTNO75072 461 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 CYP7B1O75881 506 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 NR2F6P10588 404 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ADH5P11766 374 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 MYL12AP19105 171 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 MMP11P24347 488 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 RFX2P48378 723 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 SLC9A3P48764 834 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ANXA11P50995 505 aaKnown RBP10.15□□□□□ -0.78
CLIP4-204ENST00000404424 METAP1P53582 386 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 WNT4P56705 351 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 UBE3AQ05086 875 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 RAB40BQ12829 278 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ASAH1Q13510 395 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 GINS1Q14691 196 aa10.15□□□□□ -0.78
CLIP4-204ENST00000404424 ATAD3CQ5T2N8 411 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms