RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SPHARQ15513 63 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 KHDRBS2Q5VWX1 349 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 TYW3Q6IPR3 259 aaKnown RBP16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 ACSM5Q6NUN0 579 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 USP30Q70CQ3 517 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 ATCAYQ86WG3 371 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 KRT78Q8N1N4 520 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 RAD51AP1Q96B01 352 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 C16orf58Q96GQ5 468 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 TM9SF2Q99805 663 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 C19orf43Q9BQ61 176 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 THSD1Q9NS62 852 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 PAQR5Q9NXK6 330 aaPredicted RBP16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 FOXE1O00358 373 aaPredicted RBP16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 HOXC11O43248 304 aaPredicted RBP16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 EPHX1P07099 455 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 CLTBP09497 229 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 SSR2P43308 183 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 SOX9P48436 509 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 ZNF91Q05481 1191 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 PDE7AQ13946 482 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 BAK1Q16611 211 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 ATAT1Q5SQI0 421 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 PODNL1Q6PEZ8 512 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 LRRC56Q8IYG6 542 aaPredicted RBP16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 GATAD2BQ8WXI9 593 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 COQ10AQ96MF6 247 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 FERD3LQ96RJ6 166 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 KCNE3Q9Y6H6 103 aa16.13■□□□□ 0.17
SNRNP70-202ENST00000401730 OBSL1O75147 1896 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 HAT1O14929 419 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 PAK4O96013 591 aaPredicted RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 CXCR2P25025 360 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SLC15A1P46059 708 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 GINS1Q14691 196 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 GPAT3Q53EU6 434 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 ATAD3CQ5T2N8 411 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 PNCKQ6P2M8 343 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 KIAA1958Q8N8K9 716 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 OR8K5Q8NH50 307 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 GOT1L1Q8NHS2 421 aaPredicted RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 COL26A1Q96A83 441 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 C1GALT1C1Q96EU7 318 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 LRR1Q96L50 414 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SDHCQ99643 169 aaPredicted RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SP140LQ9H930 580 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 MOV10Q9HCE1 1003 aaKnown RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 FKBP14Q9NWM8 211 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 CNIH4Q9P003 139 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SPIN1Q9Y657 262 aaPredicted RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 UGT2B17O75795 530 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 DDCP20711 480 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 UGT2B10P36537 528 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 INSL4Q14641 139 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SNAPC1Q16533 368 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 CCDC58Q4VC31 144 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 ABI3BPQ7Z7G0 1075 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 OR6T1Q8NGN1 323 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SLC9A6Q92581 669 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 ART5Q96L15 291 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SLC6A18Q96N87 628 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 MAPKAP1Q9BPZ7 522 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SLC30A2Q9BRI3 323 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 FNDC11Q9BVV2 318 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 IRAK3Q9Y616 596 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 CENPXA8MT69 81 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 HEPACAM2A8MVW5 462 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 MYL12BO14950 172 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 PGRMC2O15173 223 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 OSMP13725 252 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 CD79BP40259 229 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 NCBP2P52298 156 aaKnown RBP eCLIP16.12■□□□□ 0.171e-17■■□□□ 11.9
SNRNP70-202ENST00000401730 DEFA1P59665 94 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 DEFA3P59666 94 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 UBE3AQ05086 875 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 KRT33BQ14525 404 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 ARMC4Q5T2S8 1044 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 LHFPL3Q86UP9 236 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 NLRP8Q86W28 1048 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 GALNT12Q8IXK2 581 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 ASCC1Q8N9N2 400 aaKnown RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SMPDL3AQ92484 453 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 FCRL4Q96PJ5 515 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 ZCCHC2Q9C0B9 1178 aaKnown RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 SAGE1Q9NXZ1 904 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 REV1Q9UBZ9 1251 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 PEX16Q9Y5Y5 336 aa16.12■□□□□ 0.17
SNRNP70-202ENST00000401730 EIF2S1P05198 315 aaKnown RBP16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 ACADLP28330 430 aa16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 C21orf58P58505 322 aa16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 ZNF181Q2M3W8 571 aa16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 ZNF770Q6IQ21 691 aaPredicted RBP16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 PGBD2Q6P3X8 592 aa16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 NLGN4YQ8NFZ3 816 aaPredicted RBP16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 KLHL6Q8WZ60 621 aa16.11■□□□□ 0.17
SNRNP70-202ENST00000401730 PDXPQ96GD0 296 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms