RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MOSPD1Q9UJG1 213 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 PAIP2BQ9ULR5 123 aaKnown RBP15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TSC22D4Q9Y3Q8 395 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SDK1Q7Z5N4 2213 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ARRDC5A6NEK1 342 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 KCNJ13O60928 360 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ARAFP10398 606 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 C21orf33P30042 268 aaPredicted RBP15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 XCR1P46094 333 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 OR1E2P47887 323 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 IDH2P48735 452 aaKnown RBP15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 BLKP51451 505 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 HMGA2P52926 109 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 AGAP7PQ5VUJ5 663 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TRIM73Q86UV7 250 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 AMZ2Q86W34 360 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 RNF130Q86XS8 419 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 LACC1Q8IV20 430 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CCDC103Q8IW40 242 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 CFAP206Q8IYR0 622 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 KBTBD8Q8NFY9 601 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TIMM29Q9BSF4 260 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 OR51B5Q9H339 312 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ERVMER34-1Q9H9K5 563 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 TM7SF3Q9NS93 570 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 IMPAD1Q9NX62 359 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SLC23A2Q9UGH3 650 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 KLF15Q9UIH9 416 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 SH2B3Q9UQQ2 575 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 HCN4Q9Y3Q4 1203 aa15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 FAM32AQ9Y421 112 aaKnown RBP15.09■□□□□ 0.01
CHRFAM7A-203ENST00000401522 ISPDA4D126 451 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 METTL15A6NJ78 407 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 SAGE2PA6NJ88 616 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 TAF4O00268 1085 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 RASGRP1O95267 797 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 TGFB1P01137 390 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 TNFP01375 233 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 CSF2P04141 144 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 RPLP0P05388 317 aaKnown RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 GADD45AP24522 165 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 LIMS1P48059 325 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 PCBP3P57721 371 aaKnown RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 TAS2R50P59544 299 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 OLR1P78380 273 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 MC1RQ01726 317 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 TSTA3Q13630 321 aaPredicted RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 LPAL2Q16609 132 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 MPEG1Q2M385 716 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 RD3Q7Z3Z2 195 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 LRRC56Q8IYG6 542 aaPredicted RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 STX19Q8N4C7 294 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 AMER2Q8N7J2 671 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 OR52J3Q8NH60 311 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 C9orf43Q8TAL5 461 aaPredicted RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 ZNF675Q8TD23 568 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 OR2M4Q96R27 311 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 NIPSNAP1Q9BPW8 284 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 MAPKAP1Q9BPZ7 522 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 IRF2BPLQ9H1B7 796 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 CCDC177Q9NQR7 707 aaPredicted RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 CCDC59Q9P031 241 aaKnown RBP15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 ACSL6Q9UKU0 697 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 RAB23Q9ULC3 237 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 GPSM3Q9Y4H4 160 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 MAP4K5Q9Y4K4 846 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 PCDHGA5Q9Y5G8 931 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 ENPP4Q9Y6X5 453 aa15.08■□□□□ 0
CHRFAM7A-203ENST00000401522 A0A1B0GVT2 93 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 A0A1W2PRB8 838 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 PRAMEF25A6NGN4 478 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 MPZL2O60487 215 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 ATP6V1G1O75348 118 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 KLHL18O94889 574 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 CCNB2O95067 398 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 GBAP04062 536 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 NME1P15531 152 aaKnown RBP15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 CASP9P55211 416 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 TAP2Q03519 686 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 DMPKQ09013 629 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 SLC5A12Q1EHB4 618 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 SETD7Q8WTS6 366 aaKnown RBP15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 ZBTB20Q9HC78 741 aaPredicted RBP15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 ACER3Q9NUN7 267 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 LRP4O75096 1905 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 DMDP11532 3685 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 SH3D21A4FU49 640 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 PRR19A6NJB7 356 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 SAP18O00422 153 aaKnown RBP15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 KLK1P06870 262 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 STSP08842 583 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 RHCEP18577 417 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 CBLP22681 906 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 UQCRC2P22695 453 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 SOAT1P35610 550 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 CDC42P60953 191 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 BNC1Q01954 994 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 IRF3Q14653 427 aa15.07■□□□□ 0
CHRFAM7A-203ENST00000401522 TOR1AIP1Q5JTV8 583 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms