RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 APCDD1LQ8NCL9 501 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 OR9A2Q8NGT5 310 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 CTHRC1Q96CG8 243 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 SENP5Q96HI0 755 aaPredicted RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 IP6K3Q96PC2 410 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 BHLHE41Q9C0J9 482 aaPredicted RBP14.87□□□□□ -0.03
HMGA1-204ENST00000401473 ENTPD4Q9Y227 616 aa14.87□□□□□ -0.03
HMGA1-204ENST00000401473 NSG1A0A0A6YYJ2 146 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 SAGE2PA6NJ88 616 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 PEX12O00623 359 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 PDPK1O15530 556 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 PGRP06401 933 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 NT5EP21589 574 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 GALNSP34059 522 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 PGDP52209 483 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 POLR2JP52435 117 aaKnown RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 CLNS1AP54105 237 aaKnown RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 STX1BP61266 288 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 SQLEQ14534 574 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 DEFB109BQ30KR1 87 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 BLOC1S3Q6QNY0 202 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 MTDHQ86UE4 582 aaKnown RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 SAMD14Q8IZD0 417 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 GLB1L3Q8NCI6 653 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 KAT2AQ92830 837 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 VPS33AQ96AX1 596 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ATAD3AQ9NVI7 634 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 MAT2BQ9NZL9 334 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ARMCX1Q9P291 453 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 PPIEQ9UNP9 301 aaKnown RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 MAPRE3Q9UPY8 281 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 KALRNO60229 2985 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 A0A1W2PRB8 838 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 HPP00738 406 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 KIR3DL1P43629 444 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 MANFP55145 182 aaKnown RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 SLC26A5P58743 744 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 MAP4K2Q12851 820 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 CHAF1BQ13112 559 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF267Q14586 743 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 AGKQ53H12 422 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF628Q5EBL2 1059 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ANKRD46Q86W74 232 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 CLECL1Q8IZS7 167 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 SLC2A12Q8TD20 617 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF721Q8TF20 911 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 DAZLQ92904 295 aaKnown RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 TUBB6Q9BUF5 446 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 PRORYQ9H606 182 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ACSS1Q9NUB1 689 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 GIMAP4Q9NUV9 329 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF639Q9UID6 485 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ZNF223Q9UK11 482 aaPredicted RBP14.86□□□□□ -0.03
HMGA1-204ENST00000401473 POLHQ9Y253 713 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 ATRXP46100 2492 aa14.86□□□□□ -0.03
HMGA1-204ENST00000401473 IGSF10Q6WRI0 2623 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 FAM234BA2RU67 622 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 ARGFXA6NJG6 315 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 IGKV3-11P04433 115 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 S100A3P33764 101 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 HBA1P69905 142 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 HSPB3Q12988 150 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 RCAN2Q14206 197 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 TERF2Q15554 542 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 SPRED3Q2MJR0 410 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 DPY19L1Q2PZI1 675 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 COL28A1Q2UY09 1125 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 BTBD16Q32M84 506 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 PLAG1Q6DJT9 500 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 MTERF4Q7Z6M4 381 aaKnown RBP14.85□□□□□ -0.03
HMGA1-204ENST00000401473 GALNT12Q8IXK2 581 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 KIF2BQ8N4N8 673 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 C7orf57Q8NEG2 295 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 B3GNT7Q8NFL0 401 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 ZBED6CLQ96FA7 236 aaPredicted RBP14.85□□□□□ -0.03
HMGA1-204ENST00000401473 TRIM4Q9C037 500 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 OR8D2Q9GZM6 311 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 ING2Q9H160 280 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 ERVK-19Q9WJR5 959 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 MAN2B2Q9Y2E5 1009 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 ARL2BPQ9Y2Y0 163 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 KCNMB2Q9Y691 235 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 CHD6Q8TD26 2715 aa14.85□□□□□ -0.03
HMGA1-204ENST00000401473 PRSS51A0A1B0GVH4 220 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 SYNDIG1LA6NDD5 238 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 NME6O75414 186 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 DNAJB5O75953 348 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 C6orf47O95873 294 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 CLPSP04118 112 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 IL6P05231 212 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 NTSP30990 170 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 SSTR4P31391 388 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 CDK9P50750 372 aaKnown RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 FUT7Q11130 342 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 MLC1Q15049 377 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 VPS26BQ4G0F5 336 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 TMEM102Q8N9M5 508 aaPredicted RBP14.84□□□□□ -0.03
HMGA1-204ENST00000401473 MORN4Q8NDC4 146 aa14.84□□□□□ -0.03
HMGA1-204ENST00000401473 OR7G2Q8NG99 324 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms