RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 KLBQ86Z14 1044 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 SNX33Q8WV41 574 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 REPS1Q96D71 796 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 NPAS1Q99742 590 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 LRRN3Q9H3W5 708 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 EXO5Q9H790 373 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 IGSF5Q9NSI5 407 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 FBXW11Q9UKB1 542 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
RUNX3-203ENST00000399916 TRBC2A0A5B9 178 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 GBAP04062 536 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 FAUP35544 74 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 YBX1P67809 324 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ALKBH2Q6NS38 261 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 KIAA1324Q6UXG2 1013 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 DNAJB3Q8WWF6 145 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 SRRQ9GZT4 340 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 USP3Q9Y6I4 520 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 A0A1B0GVM2 712 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ATG13O75143 517 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 EGFP01133 1207 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PRSS56P0CW18 603 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PPP2R1BP30154 601 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 CLCN7P51798 805 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PUM1Q14671 1186 aaKnown RBP eCLIP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 SLC5A12Q1EHB4 618 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 GSG1LQ6UXU4 331 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 KCTD9Q7L273 389 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 CCDC190Q86UF4 302 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 MFSD6LQ8IWD5 586 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 FCRL2Q96LA5 508 aaPredicted RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 TEFMQ96QE5 360 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PIGQQ9BRB3 760 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ZNF649Q9BS31 505 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 SIPA1L1O43166 1804 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 A0A0B4J203 849 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 E7EQ34 232 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 GOSR2O14653 212 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PRAMEF2O60811 474 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 GJA1P17302 382 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 HK1P19367 917 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ACVR1BP36896 505 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 AQP2P41181 271 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PCP4P48539 62 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 XKR6Q5GH73 641 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 FIP1L1Q6UN15 594 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 LIX1LQ8IVB5 337 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 MED18Q9BUE0 208 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 FBRSQ9HAH7 460 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 CBY1Q9Y3M2 126 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 SLC28A2O43868 658 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 REM1O75628 298 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 RNF224P0DH78 156 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ZNF7P17097 686 aaPredicted RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 SPAM1P38567 509 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 MNDAP41218 407 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 RAB13P51153 203 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 LILRA4P59901 499 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 HTR4Q13639 388 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ZNF273Q14593 569 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 TRAM2Q15035 370 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 PTGES3Q15185 160 aaKnown RBP13.12□□□□□ -0.31
RUNX3-203ENST00000399916 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 VASNQ6EMK4 673 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ABI3BPQ7Z7G0 1075 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 AVL9Q8NBF6 648 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 OR4M2Q8NGB6 313 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 NFKBIDQ8NI38 313 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 TLR6Q9Y2C9 796 aa13.12□□□□□ -0.31
RUNX3-203ENST00000399916 ABHD14A-ACY1A0A1B0GW23 586 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 SLC16A6O15403 523 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 B4GALT3O60512 393 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 AOC2O75106 756 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 HLA-DQB2P05538 268 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 GGT2P36268 569 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 RFX2P48378 723 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 PITPNAQ00169 270 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 TTLL10Q6ZVT0 673 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 C2CD4AQ8NCU7 369 aaPredicted RBP13.11□□□□□ -0.31
RUNX3-203ENST00000399916 C14orf79Q96F83 325 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 SECISBP2Q96T21 854 aaKnown RBP13.11□□□□□ -0.31
RUNX3-203ENST00000399916 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 MARK1Q9P0L2 795 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 ACSL6Q9UKU0 697 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 KERAO60938 352 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 STK16O75716 305 aa13.11□□□□□ -0.31
RUNX3-203ENST00000399916 TCRBP04435 133 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms