RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 OR2T3Q8NH03 318 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ZFP28Q8NHY6 868 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 STOML3Q8TAV4 291 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 CLEC4CQ8WTT0 213 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 AP3S1Q92572 193 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 TMCO6Q96DC7 493 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC41A2Q96JW4 573 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 GPR22Q99680 433 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 C7orf50Q9BRJ6 194 aaKnown RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF2Q9BSG1 426 aaPredicted RBP6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 MED10Q9BTT4 135 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 DPEP2Q9H4A9 486 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 ZCCHC4Q9H5U6 513 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 B4GALT6Q9UBX8 382 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 COL1A2P08123 1366 aa6.28□□□□□ -1.4
TM9SF4-202ENST00000398022 A0A0G2JLL6 359 aaPredicted RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRSS51A0A1B0GVH4 220 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 HELTA6NFD8 242 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 NPHS1O60500 1241 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 UBXN7O94888 489 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 IFNA10P01566 189 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 AHSGP02765 367 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 AKAP5P24588 427 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 UQCRC1P31930 480 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PER3P56645 1201 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CEACAM7Q14002 265 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SAMD4BQ5PRF9 694 aaKnown RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM46CQ5VWP2 391 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 LRRC8EQ6NSJ5 796 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRRT2Q7Z6L0 340 aaPredicted RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 LINC00346Q8IVM7 164 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC15A4Q8N697 577 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CACNG8Q8WXS5 425 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 COPS5Q92905 334 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 OR5M11Q96RB7 305 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PANX1Q96RD7 426 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PKP2Q99959 881 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ESRP2Q9H6T0 727 aaKnown RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 NDUFAF4Q9P032 175 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 GULP1Q9UBP9 304 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 DNAJB11Q9UBS4 358 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PCDHB1Q9Y5F3 818 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF25A6NGN4 478 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF26H0Y7S4 382 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SURF4O15260 269 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PHGDHO43175 533 aaKnown RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF4O60810 478 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF11O60813 436 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SOD2P04179 222 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 HEXAP06865 529 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 LAMP2P13473 410 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 BMP8BP34820 402 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 RPS5P46782 204 aaKnown RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 TAF6P49848 677 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 NRG3P56975 720 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SP3Q02447 781 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SCN1BQ07699 218 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 FOXM1Q08050 763 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 POU4F2Q12837 409 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SHBQ15464 509 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ATP13A5Q4VNC0 1218 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF14Q5SWL7 426 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF5Q5TYX0 476 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF9Q5VWM5 478 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRAMEF6Q5VXH4 476 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 VWA1Q6PCB0 445 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PIGZQ86VD9 579 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 TGIF2LXQ8IUE1 241 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 TMEM130Q8N3G9 435 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PLA2G15Q8NCC3 412 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 STYXQ8WUJ0 223 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 MRPL57Q9BQC6 102 aaKnown RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ANGPTL4Q9BY76 406 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF556Q9HAH1 456 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ABCB9Q9NP78 766 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SPAG4Q9NPE6 437 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 SLC6A13Q9NSD5 602 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 TRAF6Q9Y4K3 522 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 COL4A6Q14031 1691 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ZCWPW2A0A1B0GU75 182 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PDZK1P1A8MUH7 402 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 TMX2-CTNND1H3BSU7 103 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 UBDO15205 165 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 PRKYO43930 277 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 H6PDO95479 791 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 LGALS2P05162 132 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF23P17027 643 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 JUNBP17275 347 aaPredicted RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 DGKAP23743 735 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 THBS4P35443 961 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ADCYAP1R1P41586 468 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 ADPRHP54922 357 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 RAB10P61026 200 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 CSNK1G2P78368 415 aa6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 KRR1Q13601 381 aaKnown RBP6.27□□□□□ -1.41
TM9SF4-202ENST00000398022 FASTKQ14296 549 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms