RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FOLR1P15328 257 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 ACP1P24666 158 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 GABARAPL2P60520 117 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 TOP3AQ13472 1001 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 RUNX2Q13950 521 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CSRP2Q16527 193 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CLPPQ16740 277 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 NDUFA9Q16795 377 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 PRSS53Q2L4Q9 553 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 RFX4Q33E94 735 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 OTUD3Q5T2D3 398 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 STK32CQ86UX6 486 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 C8orf59Q8N0T1 100 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 FIG4Q92562 907 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 UCN3Q969E3 161 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 TBC1D20Q96BZ9 403 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 SLC47A1Q96FL8 570 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 MUS81Q96NY9 551 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 INPP5KQ9BT40 448 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 KAT8Q9H7Z6 458 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 ANKHQ9HCJ1 492 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 BLOC1S6Q9UL45 172 aa18.23■□□□□ 0.51
PDLIM2-204ENST00000397760 CROCCQ5TZA2 2017 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF860A6NHJ4 632 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 RFXANKO14593 260 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 PROM1O43490 865 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 TBX19O60806 448 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 NOL3O60936 208 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 CST1P01037 141 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 MT-ND1P03886 318 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 ANKRD34CP0C6C1 535 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 EFNA1P20827 205 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 RAB15P59190 212 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 PPP2R2BQ00005 443 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 IL18R1Q13478 541 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 MSRB3Q8IXL7 192 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 CLECL1Q8IZS7 167 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF555Q8NEP9 628 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 OR13F1Q8NGS4 319 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 CIDECQ96AQ7 238 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 ING2Q9H160 280 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 SLC25A37Q9NYZ2 338 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 KCMF1Q9P0J7 381 aa18.22■□□□□ 0.51
PDLIM2-204ENST00000397760 HYKKA2RU49 373 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 FITM1A5D6W6 292 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 H3BMQ9 156 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 RNASET2O00584 256 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 NTN3O00634 580 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 ABCB7O75027 752 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 DNAJB6O75190 326 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 PRKRAO75569 313 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 AIFM1O95831 613 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 GP1BAP07359 652 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 MSL3P1P0C860 447 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 DDX5P17844 614 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 LIM2P55344 173 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 MPEG1Q2M385 716 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 GARNL3Q5VVW2 1013 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 C18orf63Q68DL7 685 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 DNAJC14Q6Y2X3 702 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 NAXDQ8IW45 347 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 EID3Q8N140 333 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 RCBTB1Q8NDN9 531 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 OR5K1Q8NHB7 308 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 FAM162AQ96A26 154 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 CCDC74BQ96LY2 380 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 C10orf90Q96M02 699 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 COG8Q96MW5 612 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 CPPED1Q9BRF8 314 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 PAIP1Q9H074 479 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 IRF2BPLQ9H1B7 796 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 C5AR2Q9P296 337 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 PHF11Q9UIL8 331 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 BTNL2Q9UIR0 455 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 CDC14AQ9UNH5 594 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 V9GYQ6 96 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 C1orf226A1L170 272 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 GLOD5A6NK44 160 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 SGK494L7N484 410 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 PGRMC2O15173 223 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 OR2B3O76000 313 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 SEC14L2O76054 403 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 CPSF4O95639 269 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 CDKN2CP42773 168 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 TRPC1P48995 793 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 OLR1P78380 273 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 GRM7Q14831 915 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 TTC29Q8NA56 475 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 OR9A4Q8NGU2 314 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 EXOSC8Q96B26 276 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 ZNF764Q96H86 408 aaPredicted RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 PANX1Q96RD7 426 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 LIN28AQ9H9Z2 209 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 LYRM4Q9HD34 91 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 PARD6AQ9NPB6 346 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 FAM118AQ9NWS6 357 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 EHD3Q9NZN3 535 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 C3orf18Q9UK00 162 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 DAPP1Q9UN19 280 aa18.21■□□□□ 0.51
PDLIM2-204ENST00000397760 UNC13CQ8NB66 2214 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms