RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RBCK1Q9BYM8 510 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 C1GALT1Q9NS00 363 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 LOC102723532A0A0G2JNH3 316 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TEX51A0A1B0GUA7 166 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 C17orf113A0A1B0GUU1 675 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SYT5O00445 386 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ERAL1O75616 437 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SCO1O75880 301 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 HLA-DPB1P04440 258 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 IDSP22304 550 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ALAS2P22557 587 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 LIMS1P48059 325 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PGDP52209 483 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TAGLNQ01995 201 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NTRK2Q16620 822 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 FLYWCH1Q4VC44 716 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CLLU1OSQ5K130 101 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ATAT1Q5SQI0 421 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 WASH2PQ6VEQ5 465 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 Q6ZNB5 142 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SAMD12Q8N8I0 201 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NLGN2Q8NFZ4 835 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MRPS31Q92665 395 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NELL2Q99435 816 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF471Q9BX82 626 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NT5DC2Q9H857 520 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 BCL2L10Q9HD36 194 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MRPL15Q9P015 296 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NDUFAF4Q9P032 175 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ASB4Q9Y574 426 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 A0A0D9SEW6 157 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ANKRD61A6NGH8 418 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 OR6A2O95222 327 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 RHCEP18577 417 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 OR1E2P47887 323 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 WNT3P56703 355 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TAF13Q15543 124 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 EXOC3L2Q2M3D2 409 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SMUG1Q53HV7 270 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 RGMBQ6NW40 437 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 FAM26EQ8N5C1 309 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 KRTCAP2Q8N6L1 136 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 OR56A3Q8NH54 315 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NETO1Q8TDF5 533 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GAL3ST3Q96A11 431 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MED18Q9BUE0 208 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ARL6Q9H0F7 186 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CHST8Q9H2A9 424 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ACSS1Q9NUB1 689 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 MRPS18AQ9NVS2 196 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ACTR10Q9NZ32 417 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 DICER1Q9UPY3 1922 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TRAV19A0A0A6YYK7 116 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TRBC2A0A5B9 178 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 KIAA0355O15063 1070 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PI15O43692 258 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SOX30O94993 753 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CD2P06729 351 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 BPIP17213 487 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 LHCGRP22888 699 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 IGFBP6P24592 240 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 KHDRBS2Q5VWX1 349 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ARL9Q6T311 187 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PEG10Q86TG7 708 aaKnown RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 LYSMD2Q8IV50 215 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 LIX1LQ8IVB5 337 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 FAM181AQ8N9Y4 354 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 OR6K2Q8NGY2 324 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SNX33Q8WV41 574 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 LINC01599Q8WXQ3 324 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 COQ10AQ96MF6 247 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 GPR62Q9BZJ7 368 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TRPV4Q9HBA0 871 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NUDT15Q9NV35 164 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SRRDQ9UH36 339 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ENTPD4Q9Y227 616 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM129A0AVI4 362 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 M0R129 80 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PCDH17O14917 1159 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 OR1I1O60431 355 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ENTPD6O75354 484 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 RAB36O95755 333 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SLC11A1P49279 550 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ST8SIA6P61647 398 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PPIGQ13427 754 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 INAVAQ3KP66 663 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NDUFAF5Q5TEU4 345 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PRAMEF17Q5VTA0 474 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PLAG1Q6DJT9 500 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 AGTRAPQ6RW13 159 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM64Q6YI46 380 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF438Q7Z4V0 828 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 CCDC71Q8IV32 467 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-205ENST00000397611 PDZD9Q8IXQ8 264 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 NFKBIDQ8NI38 313 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 XAGE5Q8WWM1 108 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 EID2BQ96D98 161 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 FEVQ99581 238 aa5.19□□□□□ -1.58
PTPRD-205ENST00000397611 SUV39H2Q9H5I1 410 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms