RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZNF621Q6ZSS3 439 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 PAGE2Q7Z2X7 111 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 PPP1R3BQ86XI6 285 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 GALNT15Q8N3T1 639 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 SVOPLQ8N434 492 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 UTP15Q8TED0 518 aaKnown RBP14.05□□□□□ -0.16
CAPN3-207ENST00000397200 ZNF764Q96H86 408 aaPredicted RBP14.05□□□□□ -0.16
CAPN3-207ENST00000397200 FBXO8Q9NRD0 319 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 NDUFA13Q9P0J0 144 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 VPS4AQ9UN37 437 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 WBP11Q9Y2W2 641 aaKnown RBP14.05□□□□□ -0.16
CAPN3-207ENST00000397200 SLC22A7Q9Y694 548 aa14.05□□□□□ -0.16
CAPN3-207ENST00000397200 SCN3AQ9NY46 2000 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 A0A0G2JN53 185 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 C4orf51C9J302 202 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 RTCAO00442 366 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CPSF4O95639 269 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CLPTM1O96005 669 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 JMJD7P0C870 316 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 FGF5P12034 268 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ALOX12P18054 663 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ZNF10P21506 573 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 TPP2P29144 1249 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 PLA2G5P39877 138 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 RPL5P46777 297 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 PPP2R2BQ00005 443 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 TARDBPQ13148 414 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MPEG1Q2M385 716 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 YOD1Q5VVQ6 348 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 OR4C11Q6IEV9 310 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 KRT80Q6KB66 452 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 UBE3DQ7Z6J8 389 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 NUDT13Q86X67 352 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 FAM47BQ8NA70 645 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 WDR36Q8NI36 951 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 C10orf90Q96M02 699 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 QRFPRQ96P65 431 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CTRCQ99895 268 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 NDC1Q9BTX1 674 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SORBS1Q9BX66 1292 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ROGDIQ9GZN7 287 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ANKHQ9HCJ1 492 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 APMAPQ9HDC9 416 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CUTCQ9NTM9 273 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SLC39A1Q9NY26 324 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 DLL3Q9NYJ7 618 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 UTS2RQ9UKP6 389 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MYRFQ9Y2G1 1151 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MRPS2Q9Y399 296 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 PTPRBP23467 1997 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 NUP214P35658 2090 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 PLD2O14939 933 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ZNF749O43361 778 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SCRG1O75711 98 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CST1P01037 141 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 GNAO1P09471 354 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SMIM10L1P0DMW3 83 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ITIH1P19827 911 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 KDELR2P33947 212 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 PCGF2P35227 344 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 BSGP35613 385 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 TSFMP43897 325 aaKnown RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 GSTM5P46439 218 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MVDP53602 400 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MAPK10P53779 464 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 RAB15P59190 212 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SKP1P63208 163 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 BTN3A2P78410 334 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 DEFB134Q4QY38 66 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CEACAM20Q6UY09 585 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 CBLL1Q75N03 491 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ARHGEF39Q8N4T4 335 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 DHRSXQ8N5I4 330 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ZFP28Q8NHY6 868 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MAGEE2Q8TD90 523 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SMIM10Q96HG1 83 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 TRIM4Q9C037 500 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SLC7A5P2Q9GIP4 190 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 PISDQ9UG56 409 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 RPS6KA6Q9UK32 745 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 ADAM29Q9UKF5 820 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 SRPK3Q9UPE1 567 aa14.04□□□□□ -0.16
CAPN3-207ENST00000397200 MYOCOSA0A1B0GUC4 107 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 SNAP29O95721 258 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 KLK1P06870 262 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 TAS2R50P59544 299 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 TUBA4AP68366 448 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 C2orf80Q0P641 193 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 COL9A2Q14055 689 aaPredicted RBP14.03□□□□□ -0.16
CAPN3-207ENST00000397200 FAM53BQ14153 422 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 RGNQ15493 299 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 C3orf38Q5JPI3 329 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 PRAMEF17Q5VTA0 474 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 PWWP2BQ6NUJ5 590 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 NIPAL1Q6NVV3 410 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 TTLL10Q6ZVT0 673 aa14.03□□□□□ -0.16
CAPN3-207ENST00000397200 EIF3MQ7L2H7 374 aaKnown RBP14.03□□□□□ -0.16
CAPN3-207ENST00000397200 PATL1Q86TB9 770 aaKnown RBP14.03□□□□□ -0.16
CAPN3-207ENST00000397200 ZDHHC13Q8IUH4 622 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms