RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 MAGOHBQ96A72 148 aaKnown RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 VPS39Q96JC1 886 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 KRT12Q99456 494 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 TUBA1CQ9BQE3 449 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 TMEM79Q9BSE2 394 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 PHACTR1Q9C0D0 580 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 SNX15Q9NRS6 342 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 TEX10Q9NXF1 929 aaPredicted RBP13.64□□□□□ -0.23
SEC13-206ENST00000397102 MS4A12Q9NXJ0 267 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 CTNNAL1Q9UBT7 734 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 MED12Q93074 2177 aa13.64□□□□□ -0.23
SEC13-206ENST00000397102 HEATR5AQ86XA9 2040 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 NCF1BA6NI72 391 aaPredicted RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 NCF1CA8MVU1 366 aaPredicted RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 BANF1O75531 89 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 CLPSP04118 112 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 NCF1P14598 390 aaPredicted RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 PTPN6P29350 595 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 GCKP35557 465 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 GGT5P36269 586 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 CPOXP36551 454 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 MC3RP41968 323 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 CASP3P42574 277 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 SSR2P43308 183 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 PTH2RP49190 550 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 PCYT1AP49585 367 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 RPP38P78345 283 aaKnown RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 TNFRSF17Q02223 184 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 GAB1Q13480 694 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 TGFBIQ15582 683 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 TMEM35AQ53FP2 167 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 PAGE2BQ5JRK9 111 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 RNASEH2BQ5TBB1 312 aaKnown RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 TMEM64Q6YI46 380 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 TCAIMQ8N3R3 496 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 FAM83FQ8NEG4 500 aaPredicted RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 DOK4Q8TEW6 326 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 WNT2BQ93097 391 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 INTS12Q96CB8 462 aaKnown RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 PIK3IP1Q96FE7 263 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 UCN2Q96RP3 112 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
SEC13-206ENST00000397102 ZNF226Q9NYT6 803 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 WWOXQ9NZC7 414 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 PACSIN3Q9UKS6 424 aa13.63□□□□□ -0.23
SEC13-206ENST00000397102 C2orf92A0A1B0GVN3 265 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 RNF212BA8MTL3 300 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 H0Y3Z8 333 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 GNB5O14775 395 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 TAPBPO15533 448 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 OR10H2O60403 315 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 CDH16O75309 829 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 CRYGSP22914 178 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 PCDH1Q08174 1060 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 SLAMF1Q13291 335 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 ZNF460Q14592 562 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 TIGD3Q6B0B8 471 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 CCDC137Q6PK04 289 aaKnown RBP13.62□□□□□ -0.23
SEC13-206ENST00000397102 YRDCQ86U90 279 aaKnown RBP13.62□□□□□ -0.23
SEC13-206ENST00000397102 GCNT2Q8N0V5 402 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 SNX31Q8N9S9 440 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 ANKRD49Q8WVL7 239 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 RIT1Q92963 219 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 WFIKKN1Q96NZ8 548 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 PLAC1Q9HBJ0 212 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 PHF11Q9UIL8 331 aa13.62□□□□□ -0.23
SEC13-206ENST00000397102 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 MSTNO14793 375 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 TNFSF13O75888 250 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 CHMP24386 653 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 TLX1P31314 330 aaPredicted RBP13.61□□□□□ -0.23
SEC13-206ENST00000397102 GALNSP34059 522 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 HSPA7P48741 367 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 FAM27E3Q08E93 113 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 TBCCQ15814 346 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 PDK4Q16654 411 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 CYP1B1Q16678 543 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 MSS51Q4VC12 460 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 HLA-DQA1Q5Y7H0 255 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 C18orf63Q68DL7 685 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 ENPP6Q6UWR7 440 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 GPR180Q86V85 440 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 IGDCC3Q8IVU1 814 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 PHC2Q8IXK0 858 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 OR1J4Q8NGS1 313 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 UCN3Q969E3 161 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 KLHL28Q9NXS3 571 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 CLCF1Q9UBD9 225 aa13.61□□□□□ -0.23
SEC13-206ENST00000397102 MXRA5Q9NR99 2828 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 FAM95CA0A1B0GW59 222 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 SAP18O00422 153 aaKnown RBP13.6□□□□□ -0.23
SEC13-206ENST00000397102 SNPHO15079 494 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
SEC13-206ENST00000397102 PRKRAO75569 313 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms