RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 MRPL1Q9BYD6 325 aaKnown RBP12.76□□□□□ -0.37
SEC13-205ENST00000397101 CXXC4Q9H2H0 198 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 KCNK13Q9HB14 408 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 COQ3Q9NZJ6 369 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 TRIM33Q9UPN9 1127 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 EIF3LQ9Y262 564 aaKnown RBP12.76□□□□□ -0.37
SEC13-205ENST00000397101 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
SEC13-205ENST00000397101 A0A088AWK7 358 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 LRIT2A6NDA9 550 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 ADAM10O14672 748 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 LSM1O15116 133 aaKnown RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 UBDO15205 165 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 P2RX6O15547 441 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 ETHE1O95571 254 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 ZNF888P0CJ79 500 aaPredicted RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 C8orf89P0DMQ9 161 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 CD46P15529 392 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 ZNF10P21506 573 aaPredicted RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 HNRNPH1P31943 449 aaKnown RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 SSR2P43308 183 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 STX1BP61266 288 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 BTN3A2P78410 334 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 TUBA3CQ13748 450 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 FAM53BQ14153 422 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 MEP1AQ16819 746 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 SPIN4Q56A73 249 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 ACER2Q5QJU3 275 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 TUBA3EQ6PEY2 450 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 PAGE2Q7Z2X7 111 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 SPATA19Q7Z5L4 167 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 PIGWQ7Z7B1 504 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 DOLPP1Q86YN1 238 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 CHERPQ8IWX8 916 aaKnown RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 ARHGEF39Q8N4T4 335 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 C1orf52Q8N6N3 182 aaKnown RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 FAM98AQ8NCA5 519 aaKnown RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 CDC26Q8NHZ8 85 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 TM4SF19Q96DZ7 209 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 QRFPRQ96P65 431 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 C1orf50Q9BV19 199 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 KLHL31Q9H511 634 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 HEY2Q9UBP5 337 aa12.75□□□□□ -0.37
SEC13-205ENST00000397101 C19orf25Q9UFG5 118 aaPredicted RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 RUVBL1Q9Y265 456 aaKnown RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 POLR3HQ9Y535 204 aaPredicted RBP12.75□□□□□ -0.37
SEC13-205ENST00000397101 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 GNG14A0A1W2PPG7 69 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 NPIPA5E9PKD4 350 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 FAM227AF5H4B4 570 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 RTCAO00442 366 aaKnown RBP12.74□□□□□ -0.37
SEC13-205ENST00000397101 PRRG2O14669 202 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 KLK1P06870 262 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 ABOP16442 354 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 ERVK-8P63133 956 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 C6orf136Q5SQH8 315 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 CCNYL2Q5T2Q4 361 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 IL23RQ5VWK5 629 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 OR4C11Q6IEV9 310 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 CYP20A1Q6UW02 462 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 LARP4Q71RC2 724 aaKnown RBP eCLIP12.74□□□□□ -0.37
SEC13-205ENST00000397101 ZC3H7AQ8IWR0 971 aaKnown RBP12.74□□□□□ -0.37
SEC13-205ENST00000397101 LGI4Q8N135 537 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 BEST3Q8N1M1 668 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 METTL4Q8N3J2 472 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 HORMAD2Q8N7B1 307 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 OR2L5Q8NG80 312 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 NINJ1Q92982 152 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 GAL3ST3Q96A11 431 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 SDCCAG3Q96C92 435 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 MS4A6EQ96DS6 147 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 MMABQ96EY8 250 aaPredicted RBP12.74□□□□□ -0.37
SEC13-205ENST00000397101 MAELQ96JY0 434 aaKnown RBP12.74□□□□□ -0.37
SEC13-205ENST00000397101 MARK4Q96L34 752 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 SIGLEC12Q96PQ1 595 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 KCNC2Q96PR1 638 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 FOXC2Q99958 501 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 UTP23Q9BRU9 249 aaKnown RBP12.74□□□□□ -0.37
SEC13-205ENST00000397101 EBPLQ9BY08 206 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 SLC6A16Q9GZN6 736 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 ROGDIQ9GZN7 287 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 SYNPO2LQ9H987 977 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 ANKHQ9HCJ1 492 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
SEC13-205ENST00000397101 PPT2Q9UMR5 302 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 NPIPA1Q9UND3 350 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 TMED5Q9Y3A6 229 aa12.74□□□□□ -0.37
SEC13-205ENST00000397101 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 PLPP1O14494 284 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 FOXS1O43638 330 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 PCDH7O60245 1069 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 SEMA3DO95025 777 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 NADKO95544 446 aaPredicted RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 GBAP04062 536 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 ANXA4P09525 319 aaPredicted RBP12.73□□□□□ -0.37
SEC13-205ENST00000397101 ALOX12P18054 663 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 PRPH2P23942 346 aa12.73□□□□□ -0.37
SEC13-205ENST00000397101 CD96P40200 585 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms