RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SOCS2O14508 198 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 DNAJB6O75190 326 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 TREML1Q86YW5 311 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 NUP43Q8NFH3 380 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 OR5P2Q8WZ92 322 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF334Q9HCZ1 680 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 LIPT1Q9Y234 373 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 KDELR3O43731 214 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CNOT4O95628 575 aaKnown RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 TFP02787 698 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CFIP05156 583 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 AGTR2P50052 363 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 RGMBQ6NW40 437 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZC3H14Q6PJT7 736 aaKnown RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 NRROSQ86YC3 692 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CCDC116Q8IYX3 515 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 TRAM1L1Q8N609 369 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 SLC6A16Q9GZN6 736 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ACSL5Q9ULC5 683 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CYP8B1Q9UNU6 501 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF705FA8MVS1 300 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CSTAP01040 98 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF705DP0CH99 300 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF705BP0CI00 300 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 RAB31Q13636 194 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 HHATLQ9HCP6 504 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 RPS10P5Q9NQ39 176 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 DMAC2Q9NW81 257 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 COQ4Q9Y3A0 265 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 GCGRP47871 477 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 SNRPD2P62316 118 aaKnown RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 SERINC3Q13530 473 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 PPA1Q15181 289 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ALDH16A1Q8IZ83 802 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 SAMD11Q96NU1 681 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF442Q9H7R0 627 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CASC3O15234 703 aaKnown RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 Q6ZVU0 165 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 HS6ST2Q96MM7 605 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 DENRO43583 198 aaKnown RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 SLC34A2O95436 690 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 IRF2P14316 349 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
COL4A3-202ENST00000396578 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF619Q8N2I2 560 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 LRR1Q96L50 414 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 TCEAL7Q9BRU2 100 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 CACNG6Q9BXT2 260 aa13.39□□□□□ -0.27
COL4A3-202ENST00000396578 SLC1A7O00341 560 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 SHOXO15266 292 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 MMP20O60882 483 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 SPDEFO95238 335 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 AKR1C2P52895 323 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 RAB8AP61006 207 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 METTL11BQ5VVY1 283 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ERN2Q76MJ5 926 aaKnown RBP13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ASRGL1Q7L266 308 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 KRTCAP2Q8N6L1 136 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ACBD7Q8N6N7 88 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 BEST4Q8NFU0 473 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.38□□□□□ -0.27
COL4A3-202ENST00000396578 FHP07954 510 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 STSP08842 583 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF136P52737 540 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 NKX2-5P52952 324 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-202ENST00000396578 FGL2Q14314 439 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 AWAT2Q6E213 333 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 DCUN1D4Q92564 292 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 FUNDC2Q9BWH2 189 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ADAMTS6Q9UKP5 1117 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 A8MXE2 369 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 AIPO00170 330 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 ELNP15502 786 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 AARDQ4LEZ3 155 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 CARD17Q5XLA6 110 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 MYRFLQ96LU7 910 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 CDC6Q99741 560 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 FER1L6Q2WGJ9 1857 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 WDPCPO95876 746 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 PYCR1P32322 319 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 SULT1C2O00338 296 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 BDKRB2P30411 391 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 RRAS2P62070 204 aaPredicted RBP13.38□□□□□ -0.27
COL4A3-202ENST00000396578 SLC18B1Q6NT16 456 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 OR8K5Q8NH50 307 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 HDHD5Q9BXW7 423 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
COL4A3-202ENST00000396578 INPPL1O15357 1258 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms