RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DCST1Q5T197 706 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 OR5D16Q8NGK9 328 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 NDNFQ8TB73 568 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 XAGE5Q8WWM1 108 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 CNRIP1Q96F85 164 aaPredicted RBP15.85■□□□□ 0.13
NUP50-202ENST00000396096 SIPA1Q96FS4 1042 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 SH3YL1Q96HL8 342 aaPredicted RBP15.85■□□□□ 0.13
NUP50-202ENST00000396096 MACROD1Q9BQ69 325 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 BTBD2Q9BX70 525 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 UCK2Q9BZX2 261 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 SYNPO2LQ9H987 977 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 CNOT2Q9NZN8 540 aaKnown RBP15.85■□□□□ 0.13
NUP50-202ENST00000396096 NCKAP1Q9Y2A7 1128 aa15.85■□□□□ 0.13
NUP50-202ENST00000396096 NINQ8N4C6 2090 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 WASHC1A8K0Z3 465 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 M0R082 166 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 APBB3O95704 486 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 STATHP02808 62 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 FHP07954 510 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 CSNK2A2P19784 350 aaPredicted RBP15.84■□□□□ 0.13
NUP50-202ENST00000396096 OCA2Q04671 838 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 TGM3Q08188 693 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 HTR4Q13639 388 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 SEC23BQ15437 767 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 GPR19Q15760 415 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 FBXO43Q4G163 708 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 SLCO6A1Q86UG4 719 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 LCN9Q8WX39 176 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 WDR92Q96MX6 357 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 TRPC4Q9UBN4 977 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 A4GNTQ9UNA3 340 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 ENTPD4Q9Y227 616 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 EFCAB10A6NFE3 127 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 GLOD5A6NK44 160 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 ISM1B1AKI9 464 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 PROM1O43490 865 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 ERAL1O75616 437 aaKnown RBP15.84■□□□□ 0.13
NUP50-202ENST00000396096 EML2O95834 649 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 CERS1P27544 350 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 OPRL1P41146 370 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 SERPINB10P48595 397 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 VBP1P61758 197 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 RPS15AP62244 130 aaKnown RBP15.84■□□□□ 0.13
NUP50-202ENST00000396096 FUT5Q11128 374 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 ZNF846Q147U1 533 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 SLX4IPQ5VYV7 408 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 DEF8Q6ZN54 512 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 TRIM69Q86WT6 500 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 RBM45Q8IUH3 476 aaKnown RBP15.84■□□□□ 0.13
NUP50-202ENST00000396096 LACC1Q8IV20 430 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 FAM46DQ8NEK8 389 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 C9orf43Q8TAL5 461 aaPredicted RBP15.84■□□□□ 0.13
NUP50-202ENST00000396096 NT5CQ8TCD5 201 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 LGALS12Q96DT0 336 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 CRELD1Q96HD1 420 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 AKIP1Q9NQ31 210 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 TBCCD1Q9NVR7 557 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 GALNT8Q9NY28 637 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 GPR83Q9NYM4 423 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 SELENONQ9NZV5 590 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 CORINQ9Y5Q5 1042 aa15.84■□□□□ 0.13
NUP50-202ENST00000396096 A0A0G2JPF8 293 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 A0A1W2PRQ8 180 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 HNRNPCL2B2RXH8 293 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 HNRNPCL3B7ZW38 293 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 CLDN25C9JDP6 229 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 FAM227AF5H4B4 570 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 CHRM4P08173 479 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 HNRNPCL4P0DMR1 293 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 CNR2P34972 360 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 LIPAP38571 399 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 NUDT6P53370 316 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 CLDN2P57739 230 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 SNRPGP62308 76 aaKnown RBP15.83■□□□□ 0.12
NUP50-202ENST00000396096 DUSP2Q05923 314 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 SFSWAPQ12872 951 aaKnown RBP15.83■□□□□ 0.12
NUP50-202ENST00000396096 TJAP1Q5JTD0 557 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 C18orf63Q68DL7 685 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 PGBD2Q6P3X8 592 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 C16orf87Q6PH81 154 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 ENPP7Q6UWV6 458 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 VN1R4Q7Z5H5 301 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 LINC00471Q8N535 108 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 VANGL1Q8TAA9 524 aaPredicted RBP15.83■□□□□ 0.12
NUP50-202ENST00000396096 GAL3ST3Q96A11 431 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 SLC22A18Q96BI1 424 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 ZNF681Q96N22 645 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 WFDC6Q9BQY6 131 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 CDCA4Q9BXL8 241 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 AMBNQ9NP70 447 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 FBXO8Q9NRD0 319 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 GIMAP4Q9NUV9 329 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 CLN6Q9NWW5 311 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 MS4A12Q9NXJ0 267 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 ZNF624Q9P2J8 865 aaPredicted RBP15.83■□□□□ 0.12
NUP50-202ENST00000396096 FBXW2Q9UKT8 454 aa15.83■□□□□ 0.12
NUP50-202ENST00000396096 TNFRSF10CO14798 259 aa15.82■□□□□ 0.12
NUP50-202ENST00000396096 SCAMP1O15126 338 aa15.82■□□□□ 0.12
NUP50-202ENST00000396096 CASC3O15234 703 aaKnown RBP15.82■□□□□ 0.12
NUP50-202ENST00000396096 EMC8O43402 210 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms